Paraburkholderia phenoliruptrix: BUPH_03087
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Entry
BUPH_03087 CDS
T02300
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03030
DNA replication
bpx03430
Mismatch repair
bpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BUPH_03087
03430 Mismatch repair
BUPH_03087
03440 Homologous recombination
BUPH_03087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpx03032
]
BUPH_03087
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_03087
Enzymes [BR:
bpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BUPH_03087
DNA replication proteins [BR:
bpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BUPH_03087
DNA repair and recombination proteins [BR:
bpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BUPH_03087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFT86661
UniProt:
K0DKP5
LinkDB
All DBs
Position
1:3038805..3039539
Genome browser
AA seq
244 aa
AA seq
DB search
MRQLILDTETTGLNARTGDRIIEVGCVELVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIADEFRDFIQGADLIIHNAPFDIGFLDAEFALLGLPPVSTHCGEIIDT
LARAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GESHAGGEAHAPRVALDSLDLVVIAASDEELAAHQAVLDGLDKAIKGTSVWRLEPAPVSD
EQAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaactcattctcgatactgaaacgaccggcctcaatgcgcgcacgggcgaccgc
atcatcgaagtcggctgcgtcgaactggtgaaccgccgcctcaccggcaacaacctgcac
ttctatatcaatccggagcgcgacagcgatccgggcgcgctggcggtccacggcctgacc
accgagtttctcagcgacaagccgaagtttgcggaaatagccgacgagtttcgcgatttc
attcagggcgcggacctcatcattcacaacgcgccgttcgacatcggcttcctggatgcc
gaattcgcgctgctcggcctgccgcccgtgagcacgcattgcggcgagatcatcgacacg
ctcgcgcgcgccaagcagatgttccccggcaagcgcaattcgctcgacgcgctgtgcgat
cgcttcggcatcagcaatgcgcaccgcacgctgcacggcgcgctgctcgactcggagctg
ctcgccgaggtgtatctcgcgatgacgcgcggccaggaaagcctcgtcatcgacatgctg
ggggaatcgcatgccggtggcgaagcgcatgcgccgcgcgtcgcgctggactcgctcgac
ctggtggtgatcgcagccagcgacgaggaactggccgcgcatcaggcggtgctcgacggc
ctcgacaaggcgatcaaaggcacgagcgtgtggcgtctggaacctgcgcccgtgtcggat
gagcaggccgcttaa
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integrated database retrieval system
