Paraburkholderia phenoliruptrix: BUPH_03148
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Entry
BUPH_03148 CDS
T02300
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03420
Nucleotide excision repair
bpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUPH_03148
03430 Mismatch repair
BUPH_03148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_03148
Enzymes [BR:
bpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BUPH_03148
DNA repair and recombination proteins [BR:
bpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUPH_03148
MMR (mismatch excision repair)
Other MMR factors
BUPH_03148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFT86722
UniProt:
K0DQ24
LinkDB
All DBs
Position
1:complement(3106822..3109014)
Genome browser
AA seq
730 aa
AA seq
DB search
MYGYTVCVAILDPFNACQNIVLSVAESPPSDAAAWLAKLNDAQREAVEYGADTPHAPSGA
LLVIAGAGSGKTNTLAHRVANLMVKGADPRRILLLTFSRRAALEMTRRVTRIATAALGTR
AALAQGLTWAGTFHSVGARLLREYAELIGLAPAFTINDREDSADLMNLVRHELGLSAKER
RFPAKGTCFAIYSRVVNTGASLDQVLESAFPWCREWEADLRMLFAAYVDAKQKQSVLDYD
DLLLYWSHMAAEPAIAADLSARFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQ
SIYSFRGATVRNILDFPAQFDPPATRITLERNYRSTQPILAASNAVIELASERYTKNLWT
DKASAQRPRLVTVADEADQARYVVEQILEAREQGMKLKSQAVLFRAAHHSAALEIELTRR
NIPFVKFGGLKFLDSIHVKDVLAVLRWAENPRDRVAGFRVVQLLPGVGPATAAKVLDDIV
ARAGDAADNALATAAGALAAFAPPPRAQEDWRPFVKLMWSAYGRETPWPAEFEMVRRWYE
PHLARNHEDAAIRHADVLQMESIAGTYASRERFLTELTLDPPDATSDESGVPLVDEDYLI
LSTIHSAKGQEWRNVFVLNGVDGCIPSDLGTGSEEDIDEERRLLYVAMTRAKEDLHIVVP
QRFYVHNQTHLGDRHVWASRTRFIPAHLMPLFDTYAWPRVPVPSAPSAAGLAAAAQARLE
IGARLRKMWD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgtatggatatacagtatgcgtcgccattctcgatccattcaacgcctgccagaacatc
gtgctttccgtcgccgaatctccgccctccgacgccgccgcgtggctcgccaagctcaac
gacgcacagcgtgaggccgtcgaatacggcgccgataccccgcacgcgccgtccggcgcg
ctgctcgtgatcgcaggcgcgggttccggcaagaccaacacgctcgcgcatcgcgtcgcc
aatctgatggtgaagggcgccgacccgcgcagaatcctgctgttgacgttttcgcgccgc
gcggcgctggaaatgacccgccgtgtcacccgcatcgccacggcggcgctcggcacgcgc
gccgcgctcgcgcaagggctgacctgggccggcacgtttcatagcgtcggcgcgcggctc
ctgcgcgaatacgcggagcttatcggcctcgcgcccgccttcacgatcaacgaccgcgaa
gattccgccgacctcatgaacctcgtgcgtcatgaactggggctgtcggcgaaagagcgg
cgctttcccgccaagggcacctgcttcgccatttactcgcgggtcgtgaataccggcgcg
tcgctcgaccaggtgctggagagcgcgtttccatggtgccgcgaatgggaagcggatttg
cgcatgctgttcgccgcctacgtcgacgcaaagcagaagcagagcgtgctcgattacgac
gacctgctgctctactggtcgcatatggccgcggagccggccattgccgccgatctctcg
gcgcgcttcgaccacgtgctggtcgacgaatatcaggacacgaaccgcctgcaggcgtcc
attctccttgcgctcaagcccgacgggcgcggcctgaccgtggtgggcgatgacgcccag
tccatctattcgtttcgcggcgcgaccgtgcgcaatattctcgacttccccgcgcaattc
gacccgcccgccacgcgcatcacgctggagcgcaattaccgctccacgcagccgatcctc
gcggcgtcgaatgcggtgatcgagctggccagcgagcgctacacgaagaacctctggacc
gacaaggcatcggcacagcgcccgcgtctcgtgacggtcgccgacgaggccgaccaggcg
cgctacgtcgtcgagcagatactcgaagcacgcgagcagggcatgaagctgaagtcgcag
gccgtgctgtttcgcgccgcgcatcacagcgccgcgctcgaaatcgaactcacgcggcgc
aatattccgttcgtgaaattcggcgggctcaagtttctggattcgattcacgtcaaggac
gtgctcgcggtgctgcgctgggccgagaatccgcgcgaccgggtggcgggttttcgcgtc
gtgcaactgctgccgggcgtggggccggccaccgccgcgaaggtgctggacgacatcgtc
gcccgcgcgggcgacgccgccgacaatgcgctcgcgacggcggcaggcgcgctcgcggca
ttcgccccgccgcctcgcgcgcaggaagactggcgtccgttcgtcaagctgatgtggagc
gcgtacgggcgtgagacgccgtggcccgccgaattcgagatggtacggcgctggtacgag
ccgcatctcgcgcgcaatcacgaagacgctgcgatccgccatgccgacgtgctgcaaatg
gaaagcatcgcgggcacgtatgcgtcgcgcgaacgcttcctgacggaactcacgctcgat
ccgcccgacgccaccagcgacgagtcgggcgtgccgctcgtcgacgaagactatctgatc
ctgtccaccatccattcggcgaaagggcaggagtggcgcaacgtgttcgtgctgaatggc
gtcgacggctgcattccgtccgatctgggcacgggcagcgaagaagacatcgacgaagag
cgccgcctgctctatgtagcaatgacgcgcgccaaggaagacctgcatatcgtcgtgccg
cagcgtttttatgtgcacaaccagacgcatctcggcgaccgccatgtctgggcgtcgcgc
acgcgcttcattcccgcgcatctcatgccgttgttcgacacctacgcgtggccgcgcgtc
cccgtgccgagcgcgccgagcgccgcggggctggccgccgcggcgcaggccagactggaa
atcggggcgaggctcaggaagatgtgggactga
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