Paraburkholderia phenoliruptrix: BUPH_03389
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Entry
BUPH_03389 CDS
T02300
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx00061
Fatty acid biosynthesis
bpx00071
Fatty acid degradation
bpx01100
Metabolic pathways
bpx01212
Fatty acid metabolism
bpx02024
Quorum sensing
bpx04146
Peroxisome
Module
bpx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BUPH_03389
00071 Fatty acid degradation
BUPH_03389
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BUPH_03389
09145 Cellular community - prokaryotes
02024 Quorum sensing
BUPH_03389
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpx01004
]
BUPH_03389
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpx04147
]
BUPH_03389
Enzymes [BR:
bpx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BUPH_03389
Lipid biosynthesis proteins [BR:
bpx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BUPH_03389
Exosome [BR:
bpx04147
]
Exosomal proteins
Exosomal proteins of breast milk
BUPH_03389
Exosomal proteins of breast cancer cells
BUPH_03389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AFT86960
UniProt:
K0DPV8
LinkDB
All DBs
Position
1:3381914..3383527
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AA seq
537 aa
AA seq
DB search
MFRRDAHRARNRIQETPLSNPSPSRPALDVPALLAALPARISDLPALAAARDPQHVALIE
DARRLSNAQLQEAVEAAAALLRQWGVRGGDRVMIVAENSIAQIVLLFATARLDAWALVSN
ARLSAAELDAIRAHAQPRVTAYVTESSVDASQHAQRHGATPAPTLAPDIGAWSHTVDAAA
QAEPVEAANHRQCAALIYTTGTTGAPKGVMLSHRNLLFIAAVSSRLRQVRPDDVVYAVLP
ISHVYGFASVCLGSLHAGATLRLAPRFAPEAVRRALADERVSIFQGVPAMHAKLLEHLKT
HGHAWRAPHLRFVYSGGSPLDAALKAHVESVYGLPLHNGYGMTESSPTVSQTLLDAPRSD
CSVGAVIPGVEVRFVGLDGVDAAPGEIGELWVRGPNVMLGYYRNPEQTRAAVTQDGWLKT
GDLARQDSDGALHIVGRSKDLIIRSGFNVYPAEVEHVLNAHPQVVQSAVIGRAVEGNEEV
IAFVELAANATVTPNELVAWCAERLAPYKRPAEVKVLAALPAASTGKILKHRLRELV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgttccggcgcgatgcacaccgggcacgcaaccgcattcaggagacgcccttgagcaac
ccttcgccctctcgtcccgccctcgacgttcccgcgctgctggccgcgttgcccgcgcgc
atttccgatcttcccgcgctggccgccgcgcgcgatccgcagcatgtcgcgctcatcgag
gacgcgcgccgcctgagcaacgcgcagctgcaggaagccgtcgaggccgccgccgctctg
ttgcgccaatggggcgtgcgcggcggcgatcgcgtgatgatcgtggcggagaacagcatc
gctcagatcgtgttgctgttcgccaccgcgcggctcgacgcgtgggcactggtgtcgaat
gcgcggctgtcggcggcggaactggacgcgattcgcgcgcacgcgcagccgcgcgtgacg
gcgtacgtgacggaaagctccgtcgatgccagccagcacgcgcagcgtcacggggcgacg
cctgcgccgaccctggcgccggacatcggtgcatggtcccacacggtggacgctgcggcc
caagcggaaccggtcgaagccgcgaaccaccgccaatgcgcggcgctgatctacaccacc
ggcactaccggcgcgccgaaaggcgtgatgctgtcgcatcgcaatctgctttttatcgcc
gcggtgtcgagccgtctgcgccaggtgcgtcccgacgatgtcgtgtatgcggtgctgccc
atttcgcatgtgtacggcttcgcgtcggtgtgcctcggcagtctgcacgccggcgcgacc
ttgcgcctcgcgccgcgctttgcgccggaagcggtgcgccgcgccctcgccgacgaacgt
gtgtcgatattccagggcgtgccggccatgcacgcgaaattgctggagcatctgaaaacg
cacggacacgcgtggcgcgcgccgcatctgcgctttgtctactcgggcggctcgccgctc
gacgccgcgctcaaggcgcacgtggagagcgtctacggtttgccgctgcacaacggctac
ggcatgaccgaaagcagtcccaccgtctcgcagaccctgctcgacgcgccgcgcagcgac
tgctccgtcggcgcggtgattccgggcgtggaagtgcgcttcgtcggtctggacggcgtg
gatgccgcgcccggcgagatcggcgagctatgggtgcgcggcccgaacgtgatgctcggc
tactaccgcaatccggagcagacgcgcgccgccgtcacgcaggacggctggctcaaaacc
ggcgacctcgcgcggcaggacagcgacggcgcgctgcatatcgtcgggcgcagcaaggat
ttgatcatccgctcgggcttcaatgtgtatcccgccgaagtcgagcatgtgttgaacgcg
catccgcaggtcgtgcagtcggcggtgatcggtcgtgcggtcgagggcaatgaggaagtc
attgcattcgtcgaactggcggcgaacgcgaccgtcacacccaacgaactggttgcgtgg
tgcgccgagcgtctcgcgccttacaagcgtcccgcggaagtcaaggtgctcgcggcgctg
ccggcggcatcgacgggcaagatcctgaagcaccggctgcgcgaactggtttga
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