Paraburkholderia phenoliruptrix: BUPH_03517
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Entry
BUPH_03517 CDS
T02300
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BUPH_03517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_03517
Enzymes [BR:
bpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BUPH_03517
DNA repair and recombination proteins [BR:
bpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BUPH_03517
RecFOR pathway proteins
BUPH_03517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_3
AAA_22
Sigma54_activat
Rad17
AAA_14
AAA_18
DUF815
TsaE
NTPase_1
RNA_helicase
AAA_17
NB-ARC
Bac_DnaA
AAA_28
Sigma54_activ_2
AAA_33
ABC_tran
IstB_IS21
NACHT
AAA_24
DUF6374
bpMoxR
AAA_25
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AFT87088
UniProt:
K0DSZ6
LinkDB
All DBs
Position
1:3523527..3524591
Genome browser
AA seq
354 aa
AA seq
DB search
MIETDKLAAERIIAATPVSPNEEAFERALRPRQLEEYVGQEKVRGQLEIFIEAAKRRSES
LDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDE
IHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDR
FGIVARLEFYNADELARIVTRSASLLNAQIHPDGAFEIARRARGTPRIANRLLRRVRDYA
EVKADGNITAQVADAALRMLDVDAVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEER
DTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLAAPDASSALPGLWDSAAT
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaaactcgccgccgagcgcatcatcgcggccacgcccgtctcgccg
aacgaggaagcgttcgaacgcgcgttgcgcccgcgccagctcgaagaatatgtcgggcag
gaaaaggtgcgcggccagctcgaaatttttatcgaggccgccaagcgccgctcggagtcg
ctcgaccacgtgttgctgttcgggccgccgggtctcggcaaaaccacgcttgcgcacatc
atcgcgcgcgaaatgggtgtgaatctgcggcaaacgtccgggccggtgcttgagcgcgcg
ggcgacctcgccgcgctgctcaccaatctcgaagcaaacgacgtgttgttcatcgacgag
attcaccggctttcgccagtcgtcgaggaaattctgtaccccgcgctcgaggattatcag
atcgacatcatgatcggcgaaggccccgccgcgcgcagtgtgaagctggacttgcagccg
ttcacgctggtcggtgcgaccacgcgcgccggcatgctgaccaatccgctgcgcgaccgc
ttcggcattgtcgcgcggctcgagttttacaacgccgacgaactcgcgcgtatcgtcacg
cgttcggcttcgctgctgaacgcgcagattcatccggacggcgcgttcgaaatcgcaagg
cgcgcgcgcggcacgccgcgtatcgccaaccgcctgctgcggcgcgtgcgcgactacgcg
gaggtcaaggccgacggcaacatcaccgcgcaagtggcggacgcggcgctccgaatgctc
gacgtcgacgcggtcggcttcgacctcatggaccgcaagctgctggaagcgatcctgcac
aagttcgacggcggcccggtcggcgtcgacaatctggcggccgccatcggcgaagagcgc
gacacgattgaggacgtgctcgagccgtatctgatccagcaaggcttcctgcagcgcacg
ccgcgcggccgcgtcgccacgctgctcacttaccggcacttcggactcgcggcgccggac
gcgtcgagcgcgctgcccggtctgtgggactcggctgcaacctag
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