Paraburkholderia phenoliruptrix: BUPH_03753
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Entry
BUPH_03753 CDS
T02300
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx02020
Two-component system
bpx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BUPH_03753
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BUPH_03753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpx03021
]
BUPH_03753
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpx02035
]
BUPH_03753
Transcription machinery [BR:
bpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BUPH_03753
Bacterial motility proteins [BR:
bpx02035
]
Flagellar system
Flagellar assembly proteins
Stator
BUPH_03753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HopW1-1
MarR
Motif
Other DBs
NCBI-ProteinID:
AFT87485
UniProt:
K0DRB8
LinkDB
All DBs
Position
1:complement(3954295..3955029)
Genome browser
AA seq
244 aa
AA seq
DB search
MYNAQGKISQADVLTKYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKEDQ
GAQFETYASQRIRGAMLDELRSNDWLPRSLRRTSREVETAVHKVEQNLGRSASETEIAEH
LQMPLDEYQSMLQDLHGSQLIYYEDFDRSADDEPFLDRYCVDHSDPLSALLDESLRSALV
EAIDRLPEREKLLMSLYYERGMNLREIGAVMEVSESRVCQLHSQAVARLRTRLREMAWAN
AEAT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgctcagggaaagatttcccaagccgatgttttaacgaagtacgcaccgctc
gtgcgtcgactcggcttgcagctcgtcgccaaaatgccggccagcgtcgacctcgacgat
ctgattcaggccggcatgatcggcctgctggatgccgcgagccgctacaaggaagatcag
ggcgcgcagttcgagacctacgcgagccagcggattcgcggcgcgatgctggacgaattg
cgcagtaacgactggctgccgcgcagcttgcggcgcacctcgcgagaagtggaaacagcc
gtgcacaaggtggagcagaacctgggccgctcggcgagcgaaacggagattgccgagcac
ctgcaaatgccgctcgacgagtatcagtcgatgctgcaggatctgcacggcagccagctc
atctactacgaagacttcgaccgttccgccgacgacgaaccgtttctggaccgttactgc
gtggatcactcggatccgctctcggcattgctcgacgagagcctgcgctccgcgctggtg
gaagccatcgaccgcttgccagaacgcgaaaagctgctgatgtcgctctactacgagcgc
ggcatgaacctgcgtgaaatcggcgcggtgatggaagtcagcgagtcgcgcgtatgccag
ctgcacagccaggcggtggcgcgtttgcgcacacgtctgcgcgaaatggcctgggcgaat
gccgaggccacctga
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