KEGG   Paraburkholderia phenoliruptrix: BUPH_03875
Entry
BUPH_03875        CDS       T02300                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
bpx  Paraburkholderia phenoliruptrix
Brite
KEGG Orthology (KO) [BR:bpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpx03032]
    BUPH_03875
   03036 Chromosome and associated proteins [BR:bpx03036]
    BUPH_03875
   03400 DNA repair and recombination proteins [BR:bpx03400]
    BUPH_03875
DNA replication proteins [BR:bpx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BUPH_03875
Chromosome and associated proteins [BR:bpx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BUPH_03875
DNA repair and recombination proteins [BR:bpx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BUPH_03875
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AFT87605
UniProt: K0DRL6
LinkDB
Position
1:4105860..4106138
AA seq 92 aa
MNKQELIDAVAGQTGASKAQTGETLDTLLEVIKKSVSKGDAVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgcaggacagacgggcgccagcaaggctcaa
accggtgaaacgctggacacgttgcttgaagtgatcaagaagtctgtgtcgaagggtgac
gcggtccagttgatcggcttcggcagctttggttcgggcaagcgcgcagcgcgtacgggt
cgcaacccgaagacgggcgaaaccatcaagattccggccgcgaagaccgtcaagttcacg
gcaggcaaggcgttcaaggacgcagtcaacaagcgctaa

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