Paraburkholderia phenoliruptrix: BUPH_03920
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Entry
BUPH_03920 CDS
T02300
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpx
Paraburkholderia phenoliruptrix
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpx03032
]
BUPH_03920
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_03920
Enzymes [BR:
bpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BUPH_03920
DNA replication proteins [BR:
bpx03032
]
Prokaryotic type
DNA Topoisomerases
BUPH_03920
DNA repair and recombination proteins [BR:
bpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BUPH_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFT84159
UniProt:
K0DKY2
LinkDB
All DBs
Position
1:4158..6650
Genome browser
AA seq
830 aa
AA seq
DB search
MQNRKKSMTETNNTQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLD
NSIDEALAGYCNDIQVIIHADNSISITDNGRGVPTGLKMDDKHEPKRSAAEIVMTELHAG
GKFDQNSYKVSGGLHGVGVSCVNALSAWLRLTVRRDGKKHFMEFHRGVPQNRVLEEIDGV
MTSPMQVVGDTENRGTEVHFMADETIFGNVEYHYDILAKRIRELSFLNNGVRIRLLDQRS
GKEEDFAFVGGVKGFVEYINKTKSVLHPTIFHITGEKDGVGVEVAMQWNDSYNENVLCFT
NNIPQRDGGTHLTGLRAAMTRVLNKYIADHEVAKKAKVETSGDDMREGLSCVLSVKVPEP
KFSSQTKDKLVSSEVRAPVEEVVAKALEEFLLETPNDAKIICSKIVDAARARDAARKARE
MTRRKGVLDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKV
LNVEKARYDKLLSSEQIVTLITALGCGIGKEDYNLEKLRYHRIIIMTDADVDGAHIRTLL
LTFFYRQMPEMIERGYIYIAQPPLYKIKAGKDERYLKDETEVNAHILKLALQGSELLPSE
NSTAITGDALGELARAYLLAQAVVDRLSRLYDAGALEAVMDGVAIDLSSEAAAEASAKAL
EAKLRDDALKPEVTVTTMYDPVRELRSLKVARTHHGNQKISVFDEEFQLTADYQQLVNTA
NTFKGLIGAGAVIKRGERSMAVTDFKSAMKWLLADAERNVSKQRYKGLGEMNPEQLWETT
MDPAVRRLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccggaaaaaatccatgactgaaacgaacaatacgcaacccgacaacagctac
ggcgcttcgtccattcagatcctcgaaggtctggaggcggtgcgcaagcggccggggatg
tacatcggggatacatcggatggcaccggtttgcaccacctcgtgttcgaagtgctcgac
aactcgatcgacgaagcgctggccggctattgcaacgacatccaggtgatcattcacgcg
gacaactccatctccattaccgacaacggccgcggcgtgccgaccggcctgaagatggac
gacaagcacgagccgaagcgcagcgccgccgaaatcgtgatgaccgagctgcatgccggc
ggcaagttcgaccagaacagctacaaggtgtcgggcggcctgcacggcgtgggcgtttcg
tgcgtgaacgcgctttccgcgtggctgcgcctgaccgtgcgccgcgacggcaagaagcac
ttcatggagttccaccgtggcgtgccgcaaaaccgcgtgctcgaagaaatcgacggcgtg
atgacctcgccgatgcaggtcgttggcgacaccgaaaaccgcggcaccgaagtgcatttc
atggccgacgagacgattttcggcaacgtcgaatatcactatgacattctggccaagcgt
attcgcgaactgtcgttcctgaataacggcgtgcgcattcgcctgctcgatcagcgctct
ggcaaggaagaagactttgcgttcgtcggcggcgtgaagggttttgtcgagtacatcaac
aagaccaagagcgtgctgcaccccacgattttccacatcaccggcgagaaagacggcgtg
ggcgtggaagtggccatgcagtggaacgacagctacaacgaaaacgtgctgtgcttcacg
aataacattccgcagcgcgacggcggcacgcacctcaccggtttgcgcgcggccatgacg
cgcgtgctgaacaagtacattgccgatcacgaagtcgcgaagaaggcgaaggtcgagaca
tcgggcgacgacatgcgcgaggggctttcgtgcgtgctgtcggtgaaggtgccggagccg
aagttcagctcgcagacgaaggacaagctggtgtcgtcggaagtgcgcgcgccggtggaa
gaagtcgttgcaaaggcgctggaagaattcctgctcgaaacgccgaacgacgcgaagatc
atttgcagcaagatcgtcgacgcggcgcgcgcgcgcgacgcggcccgcaaggcgcgtgaa
atgacgcggcgcaagggcgtgctcgacggcgtcggcctgccgggcaagctcgcggattgc
caggagaaggatccggcgaagtccgagatttatatcgtcgagggcgactcggcaggcggc
tcggcgaagcagggccgtgaccgcaagttccaggcgatcttgccgctgcgcggcaaggtg
ctgaacgtggagaaggcacgctacgacaagctgctctcgtcggagcagatcgtgacgctg
atcacggcgctcggctgcggcatcggcaaggaagattacaacctcgagaagctgcgctat
caccgcatcatcatcatgaccgatgctgacgtggacggcgcgcacatccgcacgctgctt
ctcacgttcttctatcgtcagatgccggagatgatcgagcgcggctacatctacatcgcg
cagccgccgctgtacaagatcaaggcgggcaaggacgagcggtatctgaaggacgagacc
gaggtcaatgcgcacattctgaagctggcgttgcagggttcggaattgctgccgtcggag
aacagcaccgcgattaccggcgatgcgctgggcgaattggcccgcgcgtatctgctggcg
caggcggtggtggaccggttgagccggctgtacgacgcgggtgcgctcgaggcggtaatg
gatggcgtggcgatcgatctgtcgagcgaggcggcggccgaggcatcggcaaaggctttg
gaagcgaagctgcgtgacgatgccttgaagcctgaagtgaccgtgaccacgatgtatgac
ccggttcgggaattgcgctcgctgaaggtggcgcgcacgcatcacggcaatcagaaaatc
tcggtgttcgacgaggagtttcagctgaccgcggattatcagcagttggtgaataccgcg
aatacattcaaggggttgatcggcgccggcgcggtgatcaagcgaggtgagcggagcatg
gcggtgaccgactttaaatcggccatgaagtggttgctggccgatgcagagcgcaatgtt
tccaagcagcggtataagggtctcggtgaaatgaatcccgagcagctgtgggaaacgacg
atggatccggcagtgcgacgtttgctgcgtgtgcagattgaagatgcaattgcggcggat
gggatctttacgacgctgatgggggatgatgtggagccccggcgggctttcattgagtct
aatgcgttgagagcggggaatattgatgtttga
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