Paraburkholderia phenoliruptrix: BUPH_04290
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Entry
BUPH_04290 CDS
T02300
Name
(GenBank) tRNA-specific 2-thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BUPH_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpx03016
]
BUPH_04290
Enzymes [BR:
bpx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BUPH_04290
Transfer RNA biogenesis [BR:
bpx03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BUPH_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Arginosuc_synth
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AFT84528
UniProt:
K0DKW4
LinkDB
All DBs
Position
1:complement(426018..427163)
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AA seq
381 aa
AA seq
DB search
MSKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQDWIDVVSVA
DLIGIDVEAVNFASEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAET
IATGHYARVRENNGRFELLKAFDHTKDQSYFLHRLNQAQLSKTLFPLGEIPKTKVREIAE
QIALPNAKKKDSTGICFIGERPFRDFLNRYLPTQPGPMKTTDGKVVGEHIGLAFYTFGQR
KGIGLGGSKDGSGEPWFVAGKDIASNTLYVAQGHDHPWLLSHTLTAGNTSWVAGEPPAEG
FACGAKTRYRQADARCTFGAAGAGGDLFQLTFDDAQWAVTPGQSAVLYDGDVCLGGGIIE
HAATGQPAAREPQKAALLSAR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagaaagtcgtagtaggcatgtcgggcggcgtcgattcgtcggtcaccgcg
tggctgctgaaggaacagggctacgacgtagtcggcctgttcatgaaaaactgggaagac
gacgacgacagcgaatactgctcgacgcggcaggactggatcgacgtggtgtccgtggcg
gatctgatcggcatcgacgtggaagccgtcaacttcgcgtccgaatacaaggaccgcgtg
ttcgccgaattcctgcgcgagtattccgccggccgcacgccgaacccggacgtgctgtgc
aacgccgagatcaagttcaaggccttcctcgatcacgccatgtcgctcggcgcggaaacc
atcgcgaccggccactatgcgcgcgtgcgggaaaacaacggccgctttgagctgctgaag
gcgttcgaccatacgaaagatcaatcctactttctgcatcggctgaatcaggcgcagctg
tcgaaaacgctgtttccactcggcgaaattcccaagaccaaggtgcgagaaatcgccgag
cagattgcgctgccgaacgcgaaaaagaaggattcgaccggcatctgctttatcggcgag
cggccgttccgcgacttcctgaaccgctatctgccgacccaacccggcccgatgaagacg
accgacggcaaagtggtcggcgagcacatcggcctcgcgttctataccttcggacagcgc
aagggcatcggccttggcggcagcaaagacggcagcggcgagccgtggttcgtggcgggc
aaggacattgcgtcgaacacgctatacgtcgcgcagggccacgaccacccgtggctgctg
agccatacgctcaccgcgggcaacacgagctgggtcgcgggcgagccgccggcggaaggc
ttcgcgtgcggcgcgaaaacccgctaccgccaggccgacgcgcgctgcacgttcggcgcg
gcaggcgcgggcggagaccttttccaactgacgttcgacgacgcccagtgggctgtcaca
ccggggcaatccgccgtgctctacgatggcgacgtgtgcctcggcggcggcatcatcgag
catgcggcgaccgggcagccggccgcgcgcgagccgcaaaaggcggcattgctgagcgcg
cgctag
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