Paraburkholderia phenoliruptrix: BUPH_04362
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Entry
BUPH_04362 CDS
T02300
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx00260
Glycine, serine and threonine metabolism
bpx00460
Cyanoamino acid metabolism
bpx00630
Glyoxylate and dicarboxylate metabolism
bpx00670
One carbon pool by folate
bpx00680
Methane metabolism
bpx01100
Metabolic pathways
bpx01110
Biosynthesis of secondary metabolites
bpx01120
Microbial metabolism in diverse environments
bpx01200
Carbon metabolism
bpx01230
Biosynthesis of amino acids
bpx01240
Biosynthesis of cofactors
bpx04981
Folate transport and metabolism
Module
bpx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BUPH_04362
09102 Energy metabolism
00680 Methane metabolism
BUPH_04362
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BUPH_04362
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BUPH_04362
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BUPH_04362
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BUPH_04362
Enzymes [BR:
bpx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BUPH_04362
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AFT84599
UniProt:
K0DM85
LinkDB
All DBs
Position
1:509243..510490
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPELWKVIELENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDAAEKLAQEHKPKLIVAGASAFAL
RIDFERLSKIAKSVGAYFMVDMAHYAGLVAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQQVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGTKEAEQVGNLIADVLDNPEDAATIERVRGQVAELTQRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgccaacgtcgaccctgaactctggaaggtgatc
gagctggaaaaccgccgtcaggaagagcacatcgaactgatcgcgtcggaaaactacacg
agcccggctgtgatggccgcgcaaggctcgcaactgaccaataaatacgcggaaggctat
cccggcaagcgctactacggcggctgcgaatatgtcgacgtggcggaacagctcgccatc
gaccgtgtcaagcagctcttcggtgccgaagcggcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtctttttcgcgatgctgaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtcaacatgtccggtaagtgg
ttcaacgtagtgagctacggcctgaacgaggccgaagacatcgactacgacgctgccgaa
aagctcgctcaggaacacaagccgaagctgatcgtcgcaggcgcgtcggctttcgcgctg
cgcatcgacttcgagcgtctctcgaagattgcgaagtccgtcggcgcatacttcatggtc
gacatggcgcactacgccggcctcgtcgccgcgggcgtctacccgaaccccgtgccgcac
gccgactttgttacgaccaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagttcgagaagcagatcaactcggcaatcttcccgggcattcagggc
ggtccgctcatgcacgtgatcgccgcaaaggctgtcgcgttcaaggaagcgctgtcgccg
gaattcaaggcttatcagcagcaagtcgtcgaaaacgcgcgcgtgctcgcggaaacgctc
gtcaagcgcggtctgcgtatcgtctccgggcgcaccgagagccacgtcatgctggtcgat
ctgcgcgcgaagaagattaccggcaaggctgcggaagccgcgctcggcgcagctcacatc
acggtcaacaagaacgcgattccgaacgacccggaaaagccgttcgtgacgagcggcatt
cgcctcggctcgccggccatgaccacgcgcggcttcggcacgaaggaagcggagcaggtg
ggcaacctgattgccgacgtactggacaacccggaggatgccgccacgatcgaacgcgtg
cgcgggcaagtcgccgagctgacgcagcgcttcccggtttaccgctaa
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