Paraburkholderia phenoliruptrix: BUPH_04694
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Entry
BUPH_04694 CDS
T02300
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx00040
Pentose and glucuronate interconversions
bpx01100
Metabolic pathways
bpx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BUPH_04694
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BUPH_04694
Enzymes [BR:
bpx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BUPH_04694
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AFT89971
UniProt:
K0DUQ6
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All DBs
Position
pSYMBR3459:complement(42222..43418)
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AA seq
398 aa
AA seq
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MNWRLLMTILIANLLCARGSAHGASSVPDSSAATGSRASQAAITAHPPTNTGGFATATGS
DDSAVMVASLADLLAAFNTRQHHILVKGEIYGGPRLTTVTFASTDWNNTTIEGASGGSAV
LKNIQLKFDGEMLPAGKNIQNVVIRNITFHGVIRDLQALPAQVYGTSSNAGINYEGVSLR
RVTNAWVDHCAFYDTSDDLMSVTLSSDKVTVSYSRFYFTSEWLTMHPDPMWNWAGKNQDL
ANERLAMLVGANRQDSYAYGGSRLHVTLHHNQFGPNLKGRPLLRGWIHAYDNYFDNGATP
TGLTAAGSDETQYNALQIGSGGVVYSENNYFFRTNQSIQIGLDSPDDVYAFHENANRYDQ
TTGRSVKGEAFSLAPVGYAYRAGTASSILKAVQTFGPR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcggctactcatgacaatattaatcgcaaatctactgtgcgctcgtggtagc
gcgcatggtgcgtcttctgtgccagattcctcagcagcgacaggctcgcgggccagtcag
gcagcaatcaccgcgcacccgccgacgaacaccggcgggttcgcaacggcgactgggtca
gacgattccgccgtcatggttgccagcctcgctgatctgctggccgcatttaatacgcga
cagcaccacatccttgtcaagggcgaaatttacggcggtccgcgactgacgaccgtcacc
ttcgcgagcacggactggaacaacaccacgatcgaaggcgccagtggaggcagtgccgtg
ctgaaaaatatccagctcaaatttgacggcgaaatgctgccggcaggcaagaacatccag
aatgtcgtgatcaggaacatcacttttcatggcgttatccgggatcttcaggccctgccc
gcccaagtctacggcacatccagcaacgccggtatcaattatgaaggcgtgtcgcttcga
cgggtcaccaatgcgtgggtcgatcattgtgccttctacgatacgagcgacgacctaatg
agcgtgacactgtcatcagataaggtgacggtttcctatagccggttctatttcaccagc
gaatggctgacgatgcaccccgatcctatgtggaactgggcgggcaagaaccaagacctg
gccaatgaacgtctggcgatgctggtaggcgcaaaccggcaggattcctatgcatatgga
gggagcaggctgcatgtcacgttgcaccacaaccagttcggcccgaacctaaagggacgt
ccgctgctgcggggctggattcacgcctacgacaactatttcgataacggggcgacaccc
actggcctcacggctgctggctcagacgagacccagtacaacgccctgcagattggcagc
ggcggcgttgtctattcggaaaacaactattttttcaggacaaaccagagcattcagatt
ggcctggattcgccggacgacgtctacgccttccatgagaacgcaaaccggtacgaccag
accaccggcagatcggtaaagggcgaggctttttcgctcgcgccagtcggttacgcgtat
cgggccgggacagcctcatctattctcaaagctgtgcagactttcggtcctcgctag
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