KEGG   Paraburkholderia phenoliruptrix: BUPH_06335
Entry
BUPH_06335        CDS       T02300                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bpx  Paraburkholderia phenoliruptrix
Pathway
bpx00300  Lysine biosynthesis
bpx00470  D-Amino acid metabolism
bpx01100  Metabolic pathways
bpx01110  Biosynthesis of secondary metabolites
bpx01120  Microbial metabolism in diverse environments
bpx01230  Biosynthesis of amino acids
Module
bpx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bpx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BUPH_06335
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BUPH_06335
Enzymes [BR:bpx01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BUPH_06335
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N S-methyl_trans SH3BP5
Other DBs
NCBI-ProteinID: AFT87335
UniProt: K0DR15
LinkDB
Position
1:3793023..3794285
AA seq 420 aa
MTRPAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTDAWNAYAGACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHADEMREALAAG
VKCFNVESIPELDRLNAVAAQMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDA
RATYQAAAAMTNLEVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEQDGLTIRHIDVGG
GLGITYDDETPPDIGDFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYEAYHVIDAVVQREVPAHVYDVVGPVCESGDWLGRERLLS
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFSGESILPA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgactcgacctgcatttgactatgtcgacggcgtgctgcacgccgaaggcgtgtccgcc
gtttcgctcgccgaacagttcggcacgccgctctatgtgtactcgcgcgccgcgctcacc
gacgcgtggaacgcctacgcgggcgcatgcgccggccgccgcgcgagcgtgcacgtcgcc
gtcaaggccaacagcaatctcgcggtgctgaacgtgttcgcgcggctcggcgcgggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtgctggcagcaggcggcaaggcggaaaac
accgtgttttccggcgtcggcaagcacgcggacgaaatgcgcgaagcgcttgcggccggc
gtcaaatgcttcaacgtcgagtcgattcctgaactggatcgcctgaacgcagtggcggcg
caaatgggcaagaaggcgccggtttcgctgcgcgtgaaccccgacgtcgacgcgaaaaca
catccctatatttccaccgggctcaagtcgaacaagttcggtgtcgcattcgaagatgcg
cgcgccacctatcaggcggccgccgccatgacgaacctcgaggtggtcggcatcgactgc
catatcggttcgcagatcacggaggtggcgccttacctcgacgccgtcgacaagctcctg
gagctcgtcgagcagatcgagcaggacggcctcacaatccgtcatatcgacgtgggcggc
ggcctcggcattacctacgacgacgaaacgccgccggacatcggcgacttcgtgcgcacg
gtgctcgaccgcatcgaggcgcgcggccacggccatcgcgaggtgtacttcgagccgggc
cgttcgctcgtcggcaatgcgggcgtgctgctcacgcgcgtcgaatttttgaagccgggc
gctgaaaagaacttcgccatcgtcgacgcagccatgaacgatcttgcccgcccggccatg
tacgaggcgtatcacgtcatcgacgccgtcgttcagcgcgaggtgccggcgcatgtgtac
gacgtcgtcgggccggtctgcgaaagcggcgactggctcgggcgcgagcgcctgctctcc
gtcgagccgggcgacctgctcgccatccgctcggccggcgcgtacggctttgtgatgagc
tcgaactacaacacgcgcccgcgcgcagcggaggtcatggttgatggtacacaagcgcat
gtggtccgtgcgcgcgaggaagtccagcagctgttttcgggcgaaagcatcctgcccgcg
taa

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