Paraburkholderia phytofirmans PsJN: Bphyt_0136
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Entry
Bphyt_0136 CDS
T00765
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase system type 1 associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00300
Lysine biosynthesis
bpy00470
D-Amino acid metabolism
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
bpy01120
Microbial metabolism in diverse environments
bpy01230
Biosynthesis of amino acids
Module
bpy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bphyt_0136
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bphyt_0136
Enzymes [BR:
bpy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Bphyt_0136
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACD14575
UniProt:
B2T014
LinkDB
All DBs
Position
1:complement(152710..153918)
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AA seq
402 aa
AA seq
DB search
MSLTFLQRPPGLQFNGIDVRQLADRAGQTPFFAYDRSAIDTRVRELRSLLPSAMQLHYSI
KANPMPAVIHYLAQRVDGFDVASAQEMALALDAGATPDSIGFAGPGKSHDDLRRAVASGV
NVHVESDTQLRLVTALGWELGVQPNVVIRINPDFQVGHSGMRMGGSAAPFGVDVDQIPAL
LHELETREVALAGFHVFWGSQCLHASTIIEAQRQSVDLILRLASDLPRPLRFVNLGGGFG
IPYFPGETPLDTKVVCEAMHDWLPRLCERLPGTTPILELGRYLVGEAGIYVCRVIDRKVS
RGRTFVITDGGLHHHLAASGNFGQVLRRNFPVVIGNRPDGISRERCYVVGCLCTPLDRLA
DDVELPEAHIGDFVVVKQSGAYGHSASPVHFLSHPEPVEMLV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgactttcctccagcgcccacccgggctgcagttcaatggtatcgacgtgcgc
cagctggccgaccgtgccggccagacaccctttttcgcgtacgaccgctcggcgatcgac
acccgtgtgcgggaattgcgcagcctgctgccctccgccatgcagctgcactactcgatc
aaggcgaacccgatgcccgccgtgatccactacctggcccaacgggtcgacgggttcgat
gttgcctccgcgcaggagatggcgctggcactcgatgccggtgccactcccgactcaatc
ggctttgccgggccaggcaagtctcacgacgacctgcgccgcgcggtcgccagcggcgtc
aacgttcacgtcgagtcggatacccagttgcgccttgttaccgcgctcggatgggagctt
ggcgtgcagccgaacgtggtgatccgcatcaatcccgattttcaggtcggccacagcggc
atgcgcatgggcggcagtgcggctccgttcggcgtggatgtcgaccagattccggcattg
ctgcacgaactcgaaacgcgggaagtcgcgctcgccggtttccacgtcttctggggttcg
cagtgcctgcatgcctcaaccatcatcgaggcccagcgccagagcgtggatctcatcctt
cggctcgccagtgatctgcctcgaccactacggttcgtgaacctgggtggcggctttggc
atcccctactttccgggcgaaacaccactcgacacgaaggtggtctgcgaagcgatgcac
gactggctgcccaggctttgcgaacgtctgcccggaaccacgcccattctggaactcggg
cgttatctcgtaggagaggccggcatctatgtgtgccgtgtcattgaccggaaagtctcg
cgcggcagaacattcgtcatcacggacggcggactgcatcatcatctggcggcttccggc
aacttcggccaggtcctgcgccgcaactttccggtcgtgatcggcaaccggccagacggc
atatcacgcgagcggtgttacgtggtcgggtgcctctgcacgccgctcgaccgcctcgcg
gacgacgttgaacttcccgaagcgcacatcggggatttcgtggtggtgaagcagtcgggt
gcctatggccattcggcaagtccggtgcatttcctcagccacccggaacccgtcgaaatg
ctcgtgtga
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