Paraburkholderia phytofirmans PsJN: Bphyt_0271
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Entry
Bphyt_0271 CDS
T00765
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00260
Glycine, serine and threonine metabolism
bpy00460
Cyanoamino acid metabolism
bpy00630
Glyoxylate and dicarboxylate metabolism
bpy00670
One carbon pool by folate
bpy00680
Methane metabolism
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
bpy01120
Microbial metabolism in diverse environments
bpy01200
Carbon metabolism
bpy01230
Biosynthesis of amino acids
bpy01240
Biosynthesis of cofactors
bpy04981
Folate transport and metabolism
Module
bpy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphyt_0271
09102 Energy metabolism
00680 Methane metabolism
Bphyt_0271
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphyt_0271
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphyt_0271
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphyt_0271
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bphyt_0271
Enzymes [BR:
bpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphyt_0271
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Cys_Met_Meta_PP
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACD14698
UniProt:
B2T0X8
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All DBs
Position
1:288332..289408
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AA seq
358 aa
AA seq
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MRFIDELESLCVELLKKAFRVRYADHRLMGGMAATLVAYTALTQPGDRVMTAPLQMGGDT
SNRTNGPPGVRGTRVIDIPYSVKDGSINLDEFATIARKERPAVTGLGMTLTLFPLPIREI
KAIVSEWGGLVYFDGAHQLGLISAGLFQDPLGEGADVMTGSSGKTFSGPQGGIICWNTDR
LADTIAETIFPVLTGSHQINRVAALAVAASEMLEYGPVYMRQVVANAQALAEFLHDRGIN
VLYAERGYTQTHQIVVDSRPAGSGRTAVRRLEAANIICNEMPLPWDSVETGGVETGIRLG
TVEVTRRGMGVAEMEWIAERIAKVLHGSEATAIAPEVADFLGRFDTIYYCHEHGLPPR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcatcgacgaactggagtcgctatgcgtcgaacttctcaagaaggcgtttcgc
gtgcgctatgctgaccaccggttgatgggtggcatggcggccacgcttgtcgcctacacc
gcattgactcaacctggagatagggtgatgaccgcaccactgcagatgggcggcgacacc
agcaatcggaccaacggtccgccgggcgtgcgcgggacgagagtgatcgacattccttat
tcggtgaaggatgggagcatcaacctcgacgagtttgcgacgatagcgcgtaaggagcga
cccgcggtaaccgggctcgggatgacgctcacgctgtttccactgccgatccgggagatc
aaggccatcgtatctgaatggggcgggctcgtatatttcgacggcgcgcaccagctcggc
ctgatctcggctgggctgttccaggatccactcggcgaaggtgccgatgtcatgacgggt
tcatcgggcaagacgtttagtggtccccagggtggcatcatctgctggaataccgaccgc
ctcgctgacacgattgccgaaacgatttttcctgttcttacgggtagccaccagatcaat
cgcgtcgctgccctcgctgtggcggcgtcggaaatgctcgagtacggaccagtttacatg
cgtcaggttgtcgcgaacgcccaggcgctggcggagttccttcacgaccggggtattaac
gttctctatgcggagcgcggttatacgcagacacaccagatcgttgtcgattccagacct
gctgggagcggccgcacggccgtacgccgacttgaggctgcaaacattatctgtaacgaa
atgcctttgccctgggactccgtcgagacgggcggggttgagaccgggatcaggctgggc
accgtggaagtcacccgtcgggggatgggggtagccgagatggaatggatagccgaacgg
atcgcgaaggtgctgcatggtagcgaggcaacagcaatcgcaccggaggtcgccgatttc
ctgggtcggtttgacacgatctactactgccacgaacatggactgccgccccgttga
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