Paraburkholderia phytofirmans PsJN: Bphyt_0765
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Entry
Bphyt_0765 CDS
T00765
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00260
Glycine, serine and threonine metabolism
bpy00460
Cyanoamino acid metabolism
bpy00630
Glyoxylate and dicarboxylate metabolism
bpy00670
One carbon pool by folate
bpy00680
Methane metabolism
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
bpy01120
Microbial metabolism in diverse environments
bpy01200
Carbon metabolism
bpy01230
Biosynthesis of amino acids
bpy01240
Biosynthesis of cofactors
bpy04981
Folate transport and metabolism
Module
bpy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphyt_0765
09102 Energy metabolism
00680 Methane metabolism
Bphyt_0765
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphyt_0765
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphyt_0765
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphyt_0765
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bphyt_0765
Enzymes [BR:
bpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphyt_0765
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ACD15188
UniProt:
B2T083
LinkDB
All DBs
Position
1:845269..846516
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPELWKVIEQENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDAAEKLAQEHKPKLIVAGASAFSL
RIDFERMSKIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKQINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQQQVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGVKEAEQVGNLIADVLDNPEDAATIERVRGQVAELTQRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgccaacgtcgatcctgaactctggaaggtcatc
gagcaggaaaaccgccgtcaggaagagcatatcgaactgatcgcgtcggaaaactacacg
agcccggctgttatggctgcgcaaggctcgcaactcacgaacaagtacgctgaagggtat
ccgggcaagcgctattacggcggctgcgaatacgtcgacgtcgccgagcagctggcgatc
gaccgcgtcaagcaactgttcggcgccgaagccgcgaacgtgcagccgaactccggctcg
caggccaaccagggcgtgttcttcgccatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggtggccacctcacgcacggttcgccggtcaacatgtcgggcaagtgg
ttcaacgtggtcagctacggtctgaacgaagccgaagacatcgactacgacgctgcggag
aagctcgctcaggaacacaagccgaagctgatcgtggcgggcgcctccgcgttctcgctg
cgtatcgacttcgaacgcatgtcgaaaatcgcgaagtcggtcggcgcgtacttcatggtc
gacatggcgcattacgccggtctgatcgccgcgggcgtctatccgaacccggtgccgcac
gccgatttcgtcaccaccaccacgcacaaaagcctgcgtggcccgcgcggcggcgtgatc
ctgatgaaggccgagttcgaaaaacagatcaactcggcaatcttcccgggcattcaaggt
ggtccgctcatgcacgtgatcgccggcaaggccgtcgcgttcaaggaagccctgtcgccg
gaattcaaggcctatcagcagcaagtcgtcgaaaacgcgcgcgtgctggctgagacgctc
gtcaagcgcggtttgcgtatcgtgtcgggccgtaccgaaagtcatgtgatgctcgtcgac
ctgcgcgcgaagaagatcaccggcaaggctgcggaagccgcgctgggcgccgcgcacatc
accgtcaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgcctcggctcgccggccatgaccacgcgcggcttcggcgtcaaggaagccgagcaggtg
ggcaacctgatcgccgacgtgctggacaacccggaagacgccgccacgatcgaacgtgtg
cgcggccaggtcgctgagctgacccagcgcttcccggtttaccgctaa
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