| Entry |
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| Name |
(GenBank) DNA polymerase III, alpha subunit
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| KO |
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| Organism |
bpy Paraburkholderia phytofirmans PsJN
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bpy00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bphyt_1253
03430 Mismatch repair
Bphyt_1253
03440 Homologous recombination
Bphyt_1253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:bpy03032]
Bphyt_1253
03400 DNA repair and recombination proteins [BR:bpy03400]
Bphyt_1253
Enzymes [BR:bpy01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bphyt_1253
DNA replication proteins [BR:bpy03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bphyt_1253
DNA repair and recombination proteins [BR:bpy03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bphyt_1253
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:1405004..1408582
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| AA seq |
1192 aa
MSPMSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAKDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVE
AGWLESGLGEGLLALSGAQQGDVGLALAAGNEEAAKRNALHWAKVFPGGFYIELQRSGQP
GGEQYVQQAVALAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRSKRFTS
EQYFRTQEEMAALFADIPSALANSVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SKEGLEKRLEQLYPDAAEREAQRETYYARLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLGQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVESVLRETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAE
HRELFRQGAAKNGLTAEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLANKMAVLPPDVNLSAYRFEPVAEPDGKRSKTIRYGLG
AIKGSGQNAIEEILRAREEGPFIDIFDFCNRVDRRIVNRRTVEALIRAGAFDTLHANRAQ
LIASVSLAMEAAEQASANALQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKNEVRRFVRQKIGELKEGRDKLVAGVIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNETFEAHKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKV
QMNGNADALALRRVLEAHSAGKDEPQAVAAPAASSRGGNGGNGGGRNGGGYGGGGQRQAV
QIPNGLAVQVVYRSQNAEGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY |
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| NT seq |
3579 nt +upstreamnt +downstreamnt
atgtcgcccatgtcagatccccgcttcgtccatctccgcgttcactccgaattctcgatt
gccgacggcatcgtgcgtcttgacgacatcgtcaaggccgcggccaaagacggtcagggc
gcgctcgccctcaccgatctcggcaacgcgttcggcctcgtccgtttctacaaggaagcc
cgtggcaaaggggtcaaacccattgccggctgcgacgtctggatcaccaatccggacgat
cgcgacaagccttcccgtttgctgctgctcgtcaaagaccggcgcggctatctgaacctg
tgcgaactgctcagcaaggcatcgctcaccaatcagtaccgcggtcgtgcagaggtcgaa
gcaggctggctcgaatccggtctcggcgaaggcttgctcgcactatcaggcgcgcagcag
ggcgacgtcggcctcgcgcttgcggcgggtaatgaggaagcggccaaacgcaacgcgttg
cactgggcgaaggtgttcccgggcggcttctatatcgagttgcagcgcagcggccagccg
ggcggcgagcagtacgtgcagcaggcggtcgcgctcgcggcgtcgctgaaattgccggtg
gtcgccacgcatcccatgcagttcatgacgccggacgacttcaccgcgcacgaagcgcgc
gtgtgcatttccgaaggcgacattctggccaatccgcgccgctcgaagcgctttacgtca
gagcagtacttccgcacgcaggaagagatggcggcgctattcgcggacattccgtcggcg
ctcgccaactcggtcgaaatcgccaagcgttgcaacctcacgctcgaactcggcaagccc
aagctgccgctgttccccacgcccgacggcatgtcgctcgacgactacctcgtgcagcta
tcgaaagagggcctcgaaaagcgtctcgagcagttatatccggacgcggccgagcgcgaa
gcgcaacgcgaaacgtattacgcgcgcctcgaattcgagtgcggcacgatcatcaagatg
ggctttcccggctacttcctgatcgtggcggacttcatcaactgggcgaagaacaacggc
gtaccggtcgggccgggtcggggctcgggcgcgggttcgctggtcgcgtacgcgctcggc
gtgaccgacctcgacccgctgcgctacaacctgctgttcgaacgtttcctgaatccggag
cgggtgtccatgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatc
cagtacgtgaaggaaaagtacggtgcggacgccgtgtcgcagatcgccaccttcggcacg
atggcggcgaaggcggcggtgcgcgacatcggccgggtgctcgacctcggctacatgttc
acggacggcatcgccaagctgattccgttcaaaccgggcaagcacgtcaccatcgccgac
gcgatgaaagaagagccgctcctgcaggagcgcttcgacaatgaagacgaagtgcaccag
ctgctcgaactcgcgcagcgggtggaagggctgacgcgtaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgccaggcaagctgacggatttttgcccgctgtatacgcagggcgat
gaaagcggcgttgtgagccagtacgacaaggacgacgtcgaagccgtcggcctcgtaaag
ttcgactttttgggtctgaccacactgacgattctggattgggccgagcgctatatccgc
cgtctcgatccgtccaagcaggactggtcgctcgggcaggtgccgctcgacgacccggcg
tcgttctcgatcctgaagaaagcgaatacggtcgccgtgttccagctggaaagccgcggc
atgcaaggcatgctgaaagacgcgcagcctgaccgtttcgaggacatcatcgcgctggtc
gcgctgtatcgtccgggcccgatggacctgatcccgagcttctgcgcgcgtaagcacggc
cgcgaagtggtcgagtatccggatccgcgtgtcgaatctgttctgagagagacctacggc
atcatggtctaccaggagcaggtcatgcagatggcgcagatcatcggcggctattcgctg
ggcggcgccgacttgttgcgtcgcgcgatgggtaagaagaaggccgaggaaatggccgag
catcgcgagctgttccgccagggcgccgcgaagaacgggctgactgcggaaaaagcggac
gaaatcttcgacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcg
gcgtatgcgctgctcgcgtactacaccgcgtggctgaaggcgcatcatccggcggaattc
atggcggcgaatatgtcgctcgccatggacgacacggacaaggtcaaaatcctgttcgaa
gactgcctcgcgaacaaaatggcggtgctgccaccggacgtcaatctgtccgcttaccgc
ttcgaaccggttgccgagcctgacggcaagcgttcgaaaacgatccgctacggcctcggt
gccatcaagggcagcgggcagaacgcgatcgaggagatcctgcgcgcgcgtgaagaaggt
ccgttcatcgacatcttcgatttctgcaaccgggtcgatcgccgcattgtcaatcgccgc
acggtcgaggctttgatccgcgccggcgcgttcgacaccttgcatgcgaatcgcgcgcaa
ctgatcgcgtccgtctcactcgccatggaagccgccgagcaggcgagcgccaacgcgttg
caggcgggtctgttcgacatgggcgacgcaccctcgcaaggtcacgaactggtcgacgaa
ccggagtggccggaaaagaaaaaactgcaggaagagaaggccgcgctcggtttctacctg
tcgggccatctgttcgacgcctacaagaacgaagtgcgccgcttcgtgcgtcagaagatc
ggcgaactgaaggaagggcgcgacaagctggttgcgggcgtgatcgcatcgctgcgtacg
cagatgacccagcgcggcaagatgctgatcgcgctgctcgacgacggcaccggccaatgc
gaagtcacggtgttcaacgagacgttcgaagcgcacaagcaactgttcaaggaagacgaa
ctgctggtcgtgcagggccaggcgcgtaacgacgcgttcacgggcggcatccgcttcacc
gtcgacacggtcatggacctcggccgtgcgcgctgccgttacgcggaagcggtcaaggtg
cagatgaacggcaatgcggacgcgctggcgttgcgtcgcgtgctcgaagcgcacagcgcg
ggcaaggacgaaccgcaagcagtcgcggcgccggcggcttcatcgcgaggtggaaatggt
ggaaatggcggcggccgtaatggcggtggctatggcggaggtggccagcgtcaggcggta
cagatcccgaacgggcttgccgttcaggtggtctatcgcagccagaatgcggaaggcgaa
atgcgtctgggcgacgcatggcgcgtgaagccgaccgacgaactgctcgcagcgttgcgc
ggtgagttcgcgggaagttcgatcgagatagtctattga |
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