Paraburkholderia phytofirmans PsJN: Bphyt_1294
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Entry
Bphyt_1294 CDS
T00765
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpy03019
]
Bphyt_1294
03009 Ribosome biogenesis [BR:
bpy03009
]
Bphyt_1294
Messenger RNA biogenesis [BR:
bpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bphyt_1294
Ribosome biogenesis [BR:
bpy03009
]
Prokaryotic type
rRNA processing factors
Bphyt_1294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ACD15709
UniProt:
B2T298
LinkDB
All DBs
Position
1:complement(1451981..1453450)
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AA seq
489 aa
AA seq
DB search
MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRIAGEPQHQTPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE
ELAGDVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDESSRIQVDSRETYQ
MLADFAAEFTPAVSSKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLVIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV
LGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV
CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaaatcctgatcaatgtcacgccgcaggaaacgcgcgtcgcgctggtccag
caaggcgccgtccaggaacttcacgtcgaacgaacgctgtcgcgtggccgcgtcggcaac
gtctatctcggcaaggtcgtacgcgtgttgccgggcatgcaatccgccttcatcgacatc
ggtctggaacgcgccgcgttccttcacgtcgccgacatctggcacccgcgcattgccggc
gagccgcagcatcagacaccgcatcagccgatcgagaaaatcgtcttcgaaggccagacg
ctgatggtgcaggtcgtgaaggatccgatcggcaccaagggcgcacggctatccacgcaa
gtgagcattgccgggcgcacgctcgtgtatctgccgcaggagccgcatatcggcatctcg
cagaagatcgagagcgaagccgaacgtgaagccgtgcgtgcgcgtctgaccgccgtgctg
cccgccgatgagaaaggcggctacatcgtgcgcaccatcgcggaagatgcgaccagcgaa
gagctggccggcgacgtcgcgtatctgcgcaagacgtgggcgacgattctgtcgcaaggt
cagcgcatgccgccaaccagtctgctgtatcaggatctgaatctcgcgcaacgcgtgctg
cgcgatttcgtcaacgacgagtcgtcgcgcattcaggtcgactcgcgcgagacgtatcag
atgctggccgatttcgcggccgagttcacgccggcggtgtcgtccaagctgcaccactac
accggcgagcggccgctcttcgatctgtacaacatcgaggcggaaattcagcgcgcgttg
tcgcgccgggtggatctgaagtcaggcggttatctcgtgatcgaccagaccgaagcgatg
acgaccatcgacgtgaataccggcggctacgtcggggcgcgcaacttcgacgatacgatc
ttcaagaccaacctcgaagccgcgcacaccattgcgcggcaattgcgtctgcgcaatctg
ggcggcgtgatcattatcgactttatcgatatggagaacgtcgagcatcgcgatcaggtg
ctgggcgaattgaagaaggcgctgtcgcgcgatcgcacgcgtgtgacggtgaacgggttc
tcgcagctcggcctcgtggagatgacgcgcaagcgtacgcgtgagtctctcgcgcatgtg
ctgtgcgagccttgtccggtttgccagggcaaggggcaggtcaagacgccgcgaacggtg
tgctacgacgtgctgcgcgagattctgcgcgagtcgcggcagttcaatccgcgcgagttt
cgcgtggtggcgtcgcagcaggtgatcgatctgtttctcgaggaagagtcgcagcatctg
gcgatgctgattgattttattggcaagccggtgtcgctgcaggtggagtcgaatttgagt
caggagcagtacgatattgtgctgatgtga
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