Paraburkholderia phytofirmans PsJN: Bphyt_1413
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Entry
Bphyt_1413 CDS
T00765
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00020
Citrate cycle (TCA cycle)
bpy00620
Pyruvate metabolism
bpy00720
Other carbon fixation pathways
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
bpy01120
Microbial metabolism in diverse environments
bpy01200
Carbon metabolism
Module
bpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bpy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bpy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Bphyt_1413
00620 Pyruvate metabolism
Bphyt_1413
09102 Energy metabolism
00720 Other carbon fixation pathways
Bphyt_1413
Enzymes [BR:
bpy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Bphyt_1413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Tox-WTIP
Motif
Other DBs
NCBI-ProteinID:
ACD15828
UniProt:
B2T2L7
LinkDB
All DBs
Position
1:complement(1578332..1579855)
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AA seq
507 aa
AA seq
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MTVIKQEDLIQSIADSLQYISYYHPLDYIQALGRAYELEQSPAAKDAIAQILTNSRMCAE
GKRPICQDTGIVTVFVKVGMDVRWDGATMGVTDMINEGVRRGYLNPDNVLRASIVSPPEG
GRKNTKDNTPAVIHYEIVPGNTVDVQVAAKGGGSENKSKFAMLNPSDSIVDWILKTVPTM
GAGWCPPGMLGIGIGGTAEKAMVMAKESLMDPIDIQDVIARGPKDWIEELRVELHEKVNA
LGIGAQGLGGLATVLDVKIMAAPTHAASKPIAIIPNCAATRHAHFTLDGSGVAKLEAPSL
DAWPKVQWEPDTEKSKRVDLNTLTPEEVAAWTPGQTLLLSGKMLTGRDAAHKRIADMLAK
GEKLPVDFTNRVIYYVGPVDPVRDEAVGPAGPTTATRMDKFTETMLSQTGLISMIGKAER
GPVAIEAIKKHKAAYLMAVGGAAYLVSKAIRSAKVLAFEDLGMEAIYEFDVQDMPVTVAV
DSNGTSVHQTGPKEWQAKIGKIPVATV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcatcaaacaggaagatctgattcagagcattgctgattcgcttcagtacatc
agctactaccatccgctcgactacatccaggctctcggccgcgcctacgagctcgaacag
agccccgccgcgaaagacgccatcgcgcagattctcaccaacagccgcatgtgcgccgaa
ggcaagcgcccgatctgccaggacaccggcatcgtcacggtgttcgtgaaggtcggcatg
gacgtgcgttgggacggcgcgacgatgggcgtcaccgacatgatcaacgaaggcgtgcgc
cgtggttatctgaacccggacaacgtgctgcgcgcgtcgatcgtgagcccgccggaaggt
ggccgcaagaacacgaaggacaacacgccggccgtgatccactacgagatcgtgccgggc
aatacggtcgacgtgcaggtcgcggccaagggcggcggctcggaaaacaagtcgaagttc
gcgatgctgaatccgtcggattcgatcgtcgactggattctcaagaccgtgccgaccatg
ggcgcgggctggtgcccgccgggcatgctcggcatcggtatcggcggcaccgctgaaaaa
gcgatggtgatggcgaaggaatcgctgatggatccgatcgacattcaggacgtgatcgca
cgcggcccgaaggactggatcgaagaactgcgcgtggaactgcacgagaaggtcaacgcg
ctcggcatcggcgcgcaaggtctgggcggcctcgccaccgtgctcgacgtgaagatcatg
gccgcgccgacgcacgccgcgagcaagccgatcgcgatcatcccgaactgcgcggctacg
cgtcacgcacacttcacgctggacggttcaggcgtcgccaagctcgaagcgccgtcgctc
gacgcatggccgaaggtgcagtgggaaccggataccgagaagagcaagcgcgtcgatctg
aacacgctcacgccggaagaagtcgccgcgtggacgccgggccagacgctgctgctgtcg
ggcaagatgctgacaggccgtgacgcggctcacaagcgcatcgccgatatgctggccaag
ggcgagaagttgccggtcgacttcacgaaccgcgtgatttactacgtcggcccggtcgat
ccggtgcgcgatgaagccgtcggtcccgcgggcccgaccacggcaacgcgcatggacaag
ttcaccgagacgatgctgtcgcaaaccggcctgatctcgatgatcggcaaggcggaacgc
ggcccggtcgccatcgaggcgatcaagaagcacaaggcggcgtatctgatggccgtgggc
ggcgcggcgtacctcgtgtcgaaggcgattcgcagcgcgaaggttctcgcgttcgaagac
ctcggcatggaagcgatctacgagttcgacgtgcaggacatgccggtgaccgtggccgtc
gattcgaacggcacttccgttcatcaaaccgggccgaaggaatggcaagcaaagatcggc
aagattccggtcgcgacagtttga
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