KEGG   Paraburkholderia phytofirmans PsJN: Bphyt_1642
Entry
Bphyt_1642        CDS       T00765                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bpy  Paraburkholderia phytofirmans PsJN
Pathway
bpy00010  Glycolysis / Gluconeogenesis
bpy00020  Citrate cycle (TCA cycle)
bpy00260  Glycine, serine and threonine metabolism
bpy00280  Valine, leucine and isoleucine degradation
bpy00310  Lysine degradation
bpy00380  Tryptophan metabolism
bpy00620  Pyruvate metabolism
bpy00630  Glyoxylate and dicarboxylate metabolism
bpy00640  Propanoate metabolism
bpy00670  One carbon pool by folate
bpy00785  Lipoic acid metabolism
bpy01100  Metabolic pathways
bpy01110  Biosynthesis of secondary metabolites
bpy01120  Microbial metabolism in diverse environments
bpy01200  Carbon metabolism
bpy01210  2-Oxocarboxylic acid metabolism
bpy01240  Biosynthesis of cofactors
Module
bpy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bpy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bpy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bpy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bpy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Bphyt_1642
   00020 Citrate cycle (TCA cycle)
    Bphyt_1642
   00620 Pyruvate metabolism
    Bphyt_1642
   00630 Glyoxylate and dicarboxylate metabolism
    Bphyt_1642
   00640 Propanoate metabolism
    Bphyt_1642
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Bphyt_1642
   00280 Valine, leucine and isoleucine degradation
    Bphyt_1642
   00310 Lysine degradation
    Bphyt_1642
   00380 Tryptophan metabolism
    Bphyt_1642
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Bphyt_1642
   00670 One carbon pool by folate
    Bphyt_1642
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bpy04147]
    Bphyt_1642
Enzymes [BR:bpy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Bphyt_1642
Exosome [BR:bpy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Bphyt_1642
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like NAD_binding_8 AlaDh_PNT_C FAD_oxidored FAD_binding_3 GIDA Lys_Orn_oxgnase DAO 3HCDH_N Thi4 Amino_oxidase 2-Hacid_dh_C XdhC_C TXNDC16_N Lycopene_cycl
Other DBs
NCBI-ProteinID: ACD16052
UniProt: B2T391
LinkDB
Position
1:1856514..1857944
AA seq 476 aa
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKAL
LASSEEFENASHHLADHGISVENVSVDIAKMMARKEGIVEKMTKGIEFLFRKNKITWLKG
HGKFTGKTDAGVQIEVSGEGETETVTAKNVIIATGSKARHLPNVPVDNKIVADNEGALSF
ESTPKKLAVIGAGVIGLELGSVWRRLGADVTVLEALPEFLGAADQALAKEAAKQFKKQGL
DIHVGVKVGEVTTTDNSVTVNYTDKDGNAQKLEADRLIVSIGRVPNTDNLGLEAIGLKAN
ERGFIDVDDHCATAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEIIDGQKPHIDYNCVPWV
IYTEPEIAWVGKTEQQLKAEGREIKTGQFPMMANGRALGINKAEGFVKMIADAKTDEILG
VHIIAADASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALAVDKRALNM
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtccaaagaatttgacgtcgtcgtgatcggcgcaggccctggcggttacatcgccgcc
atccgcgcagcgcagctcggcaaaaccgtcgcatgtatcgaaaaatggaagaacccggcc
ggcgcgctgaagctcggcggcacctgcctgaacgtgggttgcatcccgtcgaaggcgctg
ctcgcgtcgtcggaagaatttgaaaacgcgtcgcatcacctcgccgaccacggcatttcc
gtggaaaacgtgtcggtcgatatcgcgaagatgatggcccgtaaagaaggcatcgtcgaa
aagatgaccaagggcatcgaattcctgttccgcaagaacaagatcacgtggctcaagggt
cacggcaagttcaccggcaagacggacgccggcgtgcagatcgaagtgagcggcgaaggc
gaaacggaaacggtcacggcgaagaacgtgatcatcgccacgggttcgaaggcacgccat
ctgccgaatgttccggtcgacaacaagatcgtcgccgacaacgaaggcgcgctgagcttc
gaatccacgccgaagaaactcgccgtgattggcgcaggcgtgatcggcctggaactgggt
tcggtgtggcgccgtctgggcgcggacgtgactgtgctcgaagcgctgccggaattcctc
ggcgcggctgaccaggcgctcgcgaaagaagcggctaagcagttcaagaagcaaggtctg
gatatccacgtcggcgtgaaggtcggcgaagtaaccacgaccgataacagcgtgacggtc
aactacacggacaaggacggcaacgcgcagaagctcgaagccgaccgtctgatcgtgtcg
atcggccgcgtgccgaacaccgacaacctcggtctcgaagcgatcggcctgaaggccaac
gagcgcggcttcatcgacgtcgacgatcattgcgcgacggcggtgccgaacgtgtacgcg
ataggcgacgtggtgcgcggcccgatgctcgcgcacaaggccgaagacgaaggcgtgctg
gttgccgaaatcatcgacggtcagaagccgcatatcgactacaactgcgtgccgtgggtg
atctacaccgaaccggaaatcgcgtgggtcggcaagacggaacagcaactgaaagcagaa
ggccgcgagatcaagacaggccagttcccgatgatggcaaacggccgcgcgctcggcatc
aacaaggcggaaggcttcgtcaagatgatcgccgatgcgaagacggacgaaatcctcggg
gtgcacatcatcgccgcggacgcatcggacctgatcgctgaagccgtggtggcgatggaa
ttcaaggcggcgtcggaagacatcggccgcatttgccatccgcacccgtcgctgtcggaa
gtcatgcgcgaagcggctctcgccgtcgacaagcgcgcgctgaacatgtaa

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