Paraburkholderia phytofirmans PsJN: Bphyt_1672
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Entry
Bphyt_1672 CDS
T00765
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00061
Fatty acid biosynthesis
bpy00071
Fatty acid degradation
bpy01100
Metabolic pathways
bpy01212
Fatty acid metabolism
bpy02024
Quorum sensing
bpy04146
Peroxisome
Module
bpy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bphyt_1672
00071 Fatty acid degradation
Bphyt_1672
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bphyt_1672
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphyt_1672
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpy01004
]
Bphyt_1672
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpy04147
]
Bphyt_1672
Enzymes [BR:
bpy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bphyt_1672
Lipid biosynthesis proteins [BR:
bpy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bphyt_1672
Exosome [BR:
bpy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bphyt_1672
Exosomal proteins of breast cancer cells
Bphyt_1672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACD16082
UniProt:
B2T3C1
LinkDB
All DBs
Position
1:complement(1888223..1890028)
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AA seq
601 aa
AA seq
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MTQPTQTTLAPGGESAAQNTAPAPTQAHAPHHAPNTDGIWYASYPADVPHEIDVSKYESV
VQFFDECIAQFRERVAYVSVGANLTYGELGRKATAFAAYLQSIGVKPGERVAIMLPNTFQ
YPVSLFGVLKAGGVVVNVNPLYTVRELAHQLKDSGAQTIIVFENFAKTVEDALPGTKVQN
VIVTGLGDLLADGLNLKGRLLNFMLRHVKKMVPAYNLPKAVPLLEALSTGYSRPLTPVRP
THDDIAFLQYTGGTTGVAKGAMLTHKNIIANLLQAKAWSEGQLTGEVETVLTPLPLYHIY
SLTVNALIFMGLGGRNILIANPRDMKRVMMIIRHEKFTGMTAVNTLYNAFLDNEEFCKRD
FSDLKLAMAGGMATQKSVAERFKAVTGKPIIEGYGLTECSPIVSMNPVDLSNMRDFEGSI
GLPAPSTQVRFRKDDGSWANIGEAGELCVKGPQVMKGYWNRPDETAKVIDEDGWLATGDI
GVMDSRGFIRLIDRKKDMILVSGFNVYPNEVEDVIAAHPDVREVAAIGVPDAAQGERVKV
FIVKRNPSLTAEQVIAHCRKNLTGYKVPKLVEFRDELPQTNVGKILRRALRDEELAKQKP
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccactcaaaccacgcttgcgccaggcggcgaatccgccgcgcagaacacg
gcgcctgctcccacacaggctcacgcgccgcaccacgcgcccaacaccgacggcatctgg
tacgcgtcgtatccagcggacgtgccgcatgaaatcgacgtgtcgaaatacgagtcggtc
gtgcagttcttcgacgaatgcatcgcgcagttccgcgagcgtgtcgcgtatgtgagcgtg
ggcgcgaacctgacctatggtgaacttggccgcaaggccaccgcgttcgccgcctatctg
caaagcatcggcgtgaagccgggcgaacgcgtggcgatcatgttgcccaatacgttccag
tatccggtctcgctgttcggcgtattgaaggccggcggcgtggtggtcaacgtgaatccg
ctctatacggtgcgcgaactcgcgcaccagttgaaggacagcggcgcgcaaaccatcatc
gtgttcgagaacttcgcgaagacggtggaagacgcactgcccggcaccaaagtgcagaac
gtcatcgtgacgggactcggcgatctgctcgccgacggcctgaatctgaagggacgtctg
ctcaatttcatgctgcggcacgtgaaaaagatggtgcccgcctacaacctgcccaaggcg
gtgccgctgctcgaagcgctttccaccggctactcgcggccgttgacgcccgtgcgcccc
acgcacgacgacatcgcgttcctgcaatacacgggcggcacgaccggcgtcgcgaagggc
gcgatgctcacgcacaagaacatcattgcgaatttgctgcaggccaaggcgtggtccgaa
ggccagttgaccggcgaagtcgaaacggtgctcacgccgctgccgctctatcacatctat
tcgttgacggtgaacgcgctgatcttcatgggactgggcgggcgcaacattctgatcgcc
aatccgcgcgacatgaagcgcgtgatgatgatcatccgtcacgagaaattcaccggcatg
accgccgtgaacacgctctataacgcgttcctcgacaacgaggaattctgcaagcgcgac
ttctccgatctcaagctcgcaatggcgggcggcatggccacgcagaagtcggtggccgaa
cgtttcaaggcggtgaccggcaagccgatcatcgaaggctacgggctcacggaatgctcg
ccgatcgtgtcgatgaatccggtcgacctctccaacatgcgcgacttcgaaggctcgatc
ggtctgcccgcgccgtccacgcaagtccgtttcaggaaggacgacggcagttgggcgaac
atcggcgaagcgggcgaattgtgcgtgaagggaccgcaggtgatgaaaggctactggaat
cgtccggacgaaaccgccaaggtaatcgacgaggacggctggctcgccaccggcgacatc
ggcgtgatggattcgcgcggctttatccggctgatcgaccggaagaaggacatgattctg
gtgtcgggcttcaacgtctatccgaacgaagtcgaagacgtgatcgcggcgcatccggac
gtgcgcgaagtcgccgcaatcggcgtacccgatgcggcgcaaggcgaacgggtgaaggtg
tttatcgttaagcgcaatccttcgctgacggccgaacaggtgatcgcgcactgccgcaag
aacctgaccggctacaaggtgccgaagctcgtcgagttccgcgacgagctgccgcaaacc
aatgtcggcaagattctgcgccgcgccctgcgcgacgaggaactcgcgaagcaaaagcct
gcctga
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