Paraburkholderia phytofirmans PsJN: Bphyt_1826
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Entry
Bphyt_1826 CDS
T00765
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03030
DNA replication
bpy03430
Mismatch repair
bpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bphyt_1826
03430 Mismatch repair
Bphyt_1826
03440 Homologous recombination
Bphyt_1826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpy03032
]
Bphyt_1826
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_1826
Enzymes [BR:
bpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bphyt_1826
DNA replication proteins [BR:
bpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bphyt_1826
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bphyt_1826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
TsaE
Mg_chelatase
AAA_assoc_2
AAA_2
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACD16234
UniProt:
B2T3S3
LinkDB
All DBs
Position
1:2049245..2051926
Genome browser
AA seq
893 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEEKVPYDAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAADLRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APTGGGGGAAGSARAPGQAGANGAKRAGAPAVAARQGASGLPATAAATPASASSRDASVN
ATAPVRETRPGDAAAVDEGAAVGASVQAAQRANGAIEVPAAVDSIQATLPDSVQGVTTEQ
SPGAEPALVAHEVNPAPLSAVGDAAAASASPATPTAALAPWDDAPTDSAANEASVAAVPN
GSETNDVAAPLDDSAPASSLSAPAAAALARTEQAAAASQESQEPPPAADSAPRRAGGASA
ALDVLRSAGLKVSSDRGRATAAATAKPAAPATPKPAVPRVVVPVPTPGAPRRAPQQDAAP
AASAAPAARTSASSAPAQRNGAEQNGASAPPWDDMPPDEYMPLTAADEGYYGLPDDGYMP
VFDSGPDDVRVNSAAAPAPAPVVDQRPLPAAVPLDPLGFKGDWPALAVDLPLKGISYQLA
FNSELMALEGNTLKLNVPVPQYAEASQVAKLKAALADRLGQTVDVLVEVGPARRTAAAHD
AALRAKRQQEAEREIGADPFVQSLIREFGASIVPGSIRPITPDAGSNGAPSVH
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcttcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcaccatgcc
tatctgtttaccggcacacgcggcgttggcaaaaccacgctgtcgcgcatcttcgccaag
gcgctgaattgcgaaaccggcgtgacttccacgccatgcggcgtgtgccgcgcgtgccgc
gagatcgacgaagggcgcttcgtcgattatgtcgagatggacgcggcgagtaatcgcggc
gtcgacgaaatggcggcgctgctggagcgtgccgtctacgcgccggtggatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgaccaaccacgccttcaacgccatgttg
aagacgctggaagaaccgcctgcgcacgtcaaattcattctcgccacgacggatccgcaa
aagattccggtcacggtgctctcgcgctgtctgcagttcaatctgaagcagatgccggct
ggccacatcgtctcgcatctcgaacatattctcggcgaagagaaggtgccgtacgacgcc
caggcgctgcgtctgctcgcgcgcgcggccgacggctcgatgcgcgacgcgctttcgctg
accgatcaggcgatcgcctattcggctaatcaggtcaatgaagaagccgtgcgtggcatg
ctcggcgcgctcgaccagagctacctgattcgtctgctcgacgcgctcgcggacggcgac
ggcgccgcagtgctgtcggtcgccgacgagatggcgttgcgcagtctgtcgttttcgacg
gcgctgcaggatctggcgagtttgctgcaccggatcgcgtgggcgcagttcgcgccgtcg
tcggtactggacgagtggcccgaggcggccgacctgcgtcgcttcgccgaagcgctgagc
gccgaacaggtgcaattgttctatcagatcgcgacgatcggtcgaagcgaactgggtctc
gcgccggacgaatacgcgggcttcaccatgacgctcttgcgcatgctggcgttcgaaccg
gcgcccacgggcggcggcggtggcgccgcgggttcggcgcgtgcgcctggccaggcgggg
gcgaacggagccaaacgtgctggcgcgccggccgtggccgcgcgacaaggcgcttcgggt
ttgcctgcgacggcagccgcgacgcctgcatcggcgagttcgcgtgacgcgagcgtgaac
gctaccgcgccggtgcgtgagacgcggcctggcgatgccgcggcggtggacgagggcgct
gcggttggcgcatcggttcaggctgcgcagcgagccaatggcgcaattgaagtgccggct
gcagttgacagtattcaggccacgctgccggattctgttcaaggcgtaacgacagagcaa
tcgcccggtgcagagccggcgctggttgctcacgaggtaaatccagcgccgttgtccgca
gtgggcgatgccgccgcggcatccgcgtcgcccgcaactcctaccgccgccttggcgccg
tgggatgacgcgcccaccgactcggccgctaacgaagcttccgtagccgctgtccccaac
ggttctgagacgaacgacgtcgccgcacctctcgacgactcagcacccgcgtcttcgttg
agcgcacccgcagcggctgcgctcgcacgcaccgagcaggccgcagcagcgtcgcaagag
tcgcaggagccgccgcccgctgccgacagcgcaccgcgtcgcgcgggtggcgcaagcgcc
gcgctcgacgtcttgcgcagcgccggtttgaaagtatcgtcggaccgtggccgcgcgact
gcggcagcgaccgcgaagcccgccgcgcccgctacgccaaaaccggccgtgccgcgcgtc
gtcgttcccgtgccgacaccgggcgcaccgcgccgcgcgccgcagcaggatgccgcgccg
gcagcatcggcagcacccgccgctcgcacgtccgcatcttcagcgcccgcacagcgcaac
ggcgccgagcagaacggcgcgtcggcgccgccgtgggacgacatgccgcccgacgaatac
atgccgctcaccgccgcggacgaaggctattacggcctgccggacgacggctacatgccc
gtgttcgacagcggcccggacgacgtccgcgtgaattccgccgccgcccccgcgccggcg
ccggtggtcgatcaacgtccactgccggccgccgtgccgctcgatccgctgggcttcaag
ggcgactggccggcgctcgccgtcgacttgccgctcaagggcatttcgtatcagctcgcg
ttcaacagcgaactcatggcgctcgaaggcaacacgctcaaattgaacgtgccggtgccg
cagtacgcggaagcgtcgcaagtcgctaaactgaaagccgcgctcgccgacaggctcggc
cagactgtcgacgtgctcgtcgaagtcggtccggcgcgtcgtacggccgccgcgcacgac
gccgccttgcgcgcgaagcgccagcaggaagcggagcgcgagatcggcgctgatccgttc
gtgcagtcgctgatccgcgagttcggcgcgagcatcgtaccgggctccattcgcccgatt
actccggacgccggttcgaacggcgcgccgtcggtccactga
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