Paraburkholderia phytofirmans PsJN: Bphyt_1839
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Entry
Bphyt_1839 CDS
T00765
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpy03009
]
Bphyt_1839
Enzymes [BR:
bpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Bphyt_1839
Ribosome biogenesis [BR:
bpy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Bphyt_1839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_ANTKMT
Methyltransf_15
TRM5-TYW2_MTfase
TRAM
Methyltransf_23
RrnaAD
MTS
Cons_hypoth95
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ACD16247
UniProt:
B2T3T6
LinkDB
All DBs
Position
1:2063931..2065349
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AA seq
472 aa
AA seq
DB search
MSRTAPHRRAPKRSKTPPPAPAHVVTGNEPVIEIVSLDMEARGVGRTETEDGTSGKVIFV
EGALPGERVSYSTHRSKPKFEQAEVVQVFRESVMRTKPKCTYFDICGGCSMQHLDIRAQV
AVKQRVLEDNLQHLAKLRPETVFRPIHGPSWGYRYRARLAVRFLPEKGGMRIGFHEKKSS
YIADMKTCEVLPPHVSAMLMPLRFMVRKLSIYDRMPQLELAVGSSVTALVVRNLEPITAA
DEQVLRDFADQHKVQFWLQPGGPDTVAPFYPLDAQLDYTLPEYGIRMPFKPTDFTQVNHA
INRVLVSRALRLLAPARTDRVLDLFCGIGNFTLPLARISKEVVGIEGSEVLTARALANAE
LNGVAGHTSFACRNLFEITADDMRALGHFDKFLIDPPREGALAVAKALVEIAQSGDGPLP
KRIVYVSCAPATLARDAGLLVHEAGYRLVGAGVVNMFPHTSHVESIALFERD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgaactgctccccatcgccgcgcgccgaagcgctccaagacgcctccgcccgcg
ccggcacacgtcgtcaccggcaacgagccggtcatcgaaatcgtttcgctcgatatggaa
gcgcgcggcgtcggccgcacggaaaccgaagacggcacgtccggcaaggttatctttgtc
gaaggcgcgttgcccggcgagcgcgtcagttattcgacgcatcgtagcaagcccaaattc
gagcaggccgaagtggtccaggtgttccgcgaaagcgtgatgcgcaccaagccgaaatgc
acttacttcgatatctgcggcggctgttcgatgcagcatctcgacattcgcgcgcaggtg
gccgtcaagcagcgtgtgctcgaagacaacctgcagcatctggcgaagctgcgcccggaa
acggtgttccggccgattcatgggccgtcctggggttatcgctaccgcgcgcgtctggct
gtgcgtttcctgccggaaaaaggcggcatgcgcatcggcttccatgagaagaagagcagc
tacatcgccgacatgaagacgtgcgaagtgctgccgccgcacgtgtcggccatgctcatg
ccgttgcgtttcatggtgcgtaagctgtcgatttacgaccgcatgccgcagcttgaactg
gcggtgggctcgtcggttacggcgctggtggtgcgcaatctcgagcccatcacggctgcg
gacgagcaggtgctgcgtgatttcgccgatcagcacaaggtgcagttctggttgcagccg
ggcggcccggatacggtcgcgccgttctatccgctcgacgcgcagctcgactacacgctg
ccggaatacggcatccgcatgccgttcaagccgaccgatttcacccaggtgaatcacgcc
atcaaccgcgtgctggtgagccgtgcgttgcgcttgctggcgccggcgcgcacggatcgc
gtgctcgatctgttctgcgggatcggtaactttacgctgccgctcgcgcggatttcgaag
gaagtcgtgggcatcgaaggcagcgaggtgttgaccgcgcgcgcgctggccaatgccgag
ttgaacggcgtggcggggcatacgtcgttcgcgtgccgcaacctgtttgaaatcaccgcc
gacgacatgcgcgcgctcggccacttcgacaagttcctgatcgatccgccgcgcgaaggt
gcgctggctgtcgccaaggcgctggtggagatcgcgcagagcggcgatggtccgctgcct
aagcgcatcgtgtatgtctcgtgcgcgccggcgaccctcgcgcgcgatgccggtctgctc
gtgcatgaggcgggctatcggctggtgggggcgggcgtggtcaatatgttcccgcatacg
tcgcatgtggagtcgattgcgttgttcgagcgggattga
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