Paraburkholderia phytofirmans PsJN: Bphyt_1848
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Entry
Bphyt_1848 CDS
T00765
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpy03009
]
Bphyt_1848
Enzymes [BR:
bpy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Bphyt_1848
Ribosome biogenesis [BR:
bpy03009
]
Prokaryotic type
ribosomal protein modification factors
Bphyt_1848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
S1CSD-TOTE-1
Motif
Other DBs
NCBI-ProteinID:
ACD16256
UniProt:
B2T3U5
LinkDB
All DBs
Position
1:2075400..2076785
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AA seq
461 aa
AA seq
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MSATPPIVPTATPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGF
IDEAVQESLDAIGEALNENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHALGEVM
QHVHTHLPKPHDPFVDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPV
ADVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGELAA
QYGAWVRLHYVYPYPSVDEVIPMMAEGPYKGHVLPYLDVPFQHAHPEVLKRMKRPANAEK
VMERVKKWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEGAT
ANELDGALPDEVREERRARFMEVAEEVSAKRIAKKVGKTLKVLVDEINADGGIGRTAADA
PEIDGVVYIAPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacacccccgattgtcccgactgccacgccgaaggtcggattcgttagcctc
ggctgcccgaaagccctggtcgattccgagcagatcatcactcaactgcgcgccgaaggt
tacgagatttccggcacgtacgacggcgcggacctcgtggtcgtcaacacctgcggcttc
atcgacgaagcagtgcaggaaagtctcgacgcgatcggcgaagcgctcaacgaaaatggc
aaggtgatcgtgaccggctgtctcggcgctaagaaaagcgcgagcggctcggggctgatc
gaagaagtgcatccgaaggtgctggccgtgaccggcccgcacgcgctcggcgaagtgatg
caacacgtgcacactcatctgccgaagccgcacgatccgttcgtcgacctggtgccggcc
gccggcgtgaagctcacgccgcgccattacgcgtacctgaaaatttccgaaggctgtaac
caccgctgcacgttctgcatcatcccgtccatgcgcggcgacctcgtgtcgcgccccgtt
gccgacgtgatgctcgaagcggaaaacctcttcaagtcgggcgtaaaagaactgctggtg
atttcgcaggacacgagcgcctatggcgtcgacgtcaaataccgcacgggtttctggaac
ggcaagccgatcaagacgcgcatgaccgatctggtcggcgcgctcggcgaactcgccgcg
caatacggcgcgtgggtgcgtctgcattacgtgtatccgtatccgagcgtcgacgaagtg
attcccatgatggccgaaggcccgtacaagggccacgtgctgccgtacctcgacgtgccg
ttccagcacgcgcatccggaagtgttgaagcgcatgaagcgcccggccaacgccgagaag
gtgatggagcgcgtgaagaaatggcgcgagatgtgcccggatctgaccattcgcagcacg
ttcatcgcgggcttcccgggtgagactgaagagcaattccagacgctgctcgatttcatc
cgcgaggcggaactggatcgcgtgggctgcttcgcctattcgccggtcgaaggcgcgacg
gctaacgaactcgacggcgccttgcccgacgaagtgcgcgaagaacgccgcgcgcgtttc
atggaagtcgccgaagaagtgtcggccaagcgtatcgcgaagaaggtcggcaagacgctc
aaggtgctggtcgacgagatcaacgcggacggcggcatcggccgcaccgcggctgacgcg
ccggagatcgacggcgtcgtgtatatcgcgccggctgcgaaggcgtcgaagcgctacaag
gtcggcgatttcgtgtcggtgaagatcaccggcgccgacggtcacgacctgtggggcgag
gtgtaa
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