Paraburkholderia phytofirmans PsJN: Bphyt_1909
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Entry
Bphyt_1909 CDS
T00765
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpy03032
]
Bphyt_1909
03036 Chromosome and associated proteins [BR:
bpy03036
]
Bphyt_1909
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_1909
DNA replication proteins [BR:
bpy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Bphyt_1909
Chromosome and associated proteins [BR:
bpy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Bphyt_1909
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Bphyt_1909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ACD16317
UniProt:
B2T406
LinkDB
All DBs
Position
1:2147071..2147343
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHVAQQADISKAAAGRALDAVIDGVKGTLKKGGSVTLVGFGTFAVGKRTARTG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacggaattgatcgatcacgttgcgcagcaagccgacatttcgaaggcagcg
gcaggccgtgcactcgacgctgtgatcgatggtgtcaaaggtacgttgaagaagggcggt
tcggtgacgttggtcggtttcggcacgttcgcggtcggcaagcgcaccgcgcgcaccggg
cgcaatccgcgcaccggcgctgccatcaaaatcaaggcggccaaggtccccaaatttagg
cctggcaaagctctgaaggatgcgctaaactaa
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integrated database retrieval system
