Paraburkholderia phytofirmans PsJN: Bphyt_2527
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Entry
Bphyt_2527 CDS
T00765
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Bphyt_2527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
PsbU
HHH_6
DUF460
Motif
Other DBs
NCBI-ProteinID:
ACD16922
UniProt:
B2SXR6
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Position
1:2854005..2856353
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AA seq
782 aa
AA seq
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MTETVALKIVQRIAAELSVQPRQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLE
ERLLYLRELEDRRAAIIASIDEQGKLTDELRTAIEGADSKQVLEDLYLPYKPKRRTRAQI
AREAGLQPLADALLANPLLDPQTEAAAYVDAEKGVADLKAALDGARDILSEQFGETAELL
GKLRDYLFNQGVVSSKVVEGKENAEEEKFRDYYDYSETIRTVPSHRALALFRGRNAGVLM
VKLGLGEELDAQVPHPGEALIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLT
NLRDEAEHEAIRVFARNLKDLLLAAPAGPKAVIGLDPGMRTGVKVAVVDRTGKVLATDVI
YPHEPRRDWDGSIAKLARICAQTQAELISIGNGTASRETDKLASELIARHPEFKLQKIVV
SEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSREH
LRKVPRLGDKTFEQAAGFLRINNGENPLDRSSVHPEAYPVVERMLAKISKHVGEVLGNRD
ALRGLSPAEFVDDRFGLPTVRDILLELEKPGRDPRPEFKTATFREGVEKVSDLTPGMVLE
GVVTNVAAFGAFIDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQIVKVKVLEVDVKRQRI
ALTMRMDDEVGVAAARSGGGAQQDRGGSGRSGGGGRGAQQQRSREPEAGGAMAAAFAKLK
QK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccgtagcactcaagatcgtacagcgcatcgccgccgaactgtccgtccag
ccgcgccaggtcgcggccgcggtgcaacttctcgacgaaggagcgactgttccgttcatc
gcccgctaccgtaaggaagtgaccgacaatctcgacgacacgcaactgcgtaacctcgag
gaacgcctgctgtatctgcgcgagctggaagaccggcgcgccgcgatcatcgcgagcatc
gacgaacagggcaagctcaccgacgagctacgcaccgcgatcgaaggcgccgacagcaag
caggtgctggaagacctgtatctcccgtataagccgaagcgccgcacgcgcgcgcagatc
gcccgtgaagccggcctgcagccgctcgccgacgcgttgctggccaatcccctgctcgac
ccgcaaaccgaagccgccgcctacgtggacgccgagaaaggcgtcgccgacctcaaggcc
gcgctcgacggcgcgcgcgacattctctcggaacagttcggcgaaaccgccgaattgctc
ggcaagctgcgcgactacctgttcaaccagggcgtggtgtcgtcgaaagtggtggaaggt
aaggaaaacgccgaagaagagaaattccgcgactactacgactactcggaaaccatccgc
accgtgccgtcgcatcgcgcgctggcgctgttccgcggccgcaatgcgggcgtgctgatg
gtcaagctggggctgggcgaagaactcgacgcgcaggtgccgcatccgggcgaagcgctg
attgcgcgccatttcggcatcgccaatcagaaccgtccggccgacaagtggctctccgac
gtgtgccgctggtgctggcgcgtgaaggtacagccgcatatcgaaaacgaactgctgacc
aatctgcgcgacgaagccgagcatgaggcgattcgcgtgttcgcgcgcaatctgaaggac
ttgctgctggcggcgcccgccggcccgaaggccgtgatcggcctcgatccgggtatgcgc
accggcgtgaaagtcgcggtggtcgaccggaccggcaaggtgctcgccaccgatgtgatc
tatccgcacgaaccgcgccgcgactgggacggctcgatcgcgaaactcgcgcgcatctgc
gcgcagacgcaggctgaattgatcagcatcggcaacggtacggcgtcgcgtgaaacggac
aagctcgcgagcgaactgattgcgcgccatccggaattcaagttgcagaagatcgtcgtg
tccgaagcgggcgcgtcggtgtactcggcctccgaactcgcggcgaaggaattccccgac
atggacgtgtcgctgcgcggcgctgtgtcgattgcgcggcgtttgcaagacccgctcgcc
gagttggtgaagattgagccaaaggcgatcggtgtcggccagtatcagcacgacgtgaat
cagcgcgaattggcacgttcgctcgatgcggtggtcgaggactgcgtgaacgcggtcggc
gtggatgcgaatacggcgtcggtcgctttgcttgcgcgcgtgtcgggtctgaatgccacg
ttggcgcgcaatatcgtcgactatcgcgatgcgaacggtccgttcccatcgcgcgagcat
ttgcgcaaagtgccgcgtctgggcgacaagacgttcgagcaggccgccgggttcctgcgc
atcaataacggtgagaatccgctcgaccgctcgtcggttcacccggaagcgtatccggtc
gtcgaacgcatgctggcgaaaatcagcaagcacgtcggcgaagtgctgggcaatcgcgac
gcgttgcgcggcctctcgcccgcggaattcgtcgacgatcgtttcggcctgccgaccgtg
cgtgacattctgctcgaactcgaaaagccgggccgcgatccgcgccccgagttcaagacc
gcgacgttccgtgaaggcgtcgaaaaggtcagcgatctgacgccaggcatggtgctcgaa
ggcgtcgtgacgaacgtggcggcattcggcgcgtttatcgatatcggcgtgcatcaggac
ggtctcgtgcacgtgtcggctatgtcgaccaagttcatcaaggacccgcatgaagtcgtc
aaggccggtcagatcgtcaaggtgaaggtgctggaagtggacgtgaaacgccagcgtatc
gctttgacgatgcgcatggacgacgaggtcggtgtggcggcggcacgcagcggtggcggc
gcgcagcaggatcgcggcggctcgggccgttcaggcggcggtggacgcggcgcgcagcaa
caacgctcgcgtgagccggaagcgggcggcgcgatggccgctgcattcgccaagctcaag
cagaagtaa
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