Paraburkholderia phytofirmans PsJN: Bphyt_2797
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Entry
Bphyt_2797 CDS
T00765
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03420
Nucleotide excision repair
bpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bphyt_2797
03430 Mismatch repair
Bphyt_2797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_2797
Enzymes [BR:
bpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bphyt_2797
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bphyt_2797
MMR (mismatch excision repair)
Other MMR factors
Bphyt_2797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ACD17191
UniProt:
B2SZK3
LinkDB
All DBs
Position
1:complement(3157753..3160104)
Genome browser
AA seq
783 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGQTNSI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDSQEASWIVEEIKALISTGTSRSEIAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLAAFANLVGKMRAETQQMSLPETVEYVVRTSG
LSEFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAVATD
DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPGYTGPASSTPAQLPA
FANEQRAAETGFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEKWLALAVAKLQ
AVE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctagccaatctcaaccccgaacaacacgccgccgtcacgctcccgaac
gagcccgccctcattctcgccggcgcgggcagcggcaagacccgcgtcctgatcacgcgc
atcgcgtggcttatccagcacggtctggcgtcgccggccacgattctggcggtgaccttc
accaacaaagccgcccgcgagatgatgtcgcgtctgtcggcgctcctgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctctgtaaccgcatgctgcgcgcgcatcac
cgcgacgcgggcctgccggccaccttccagattctcgataccgccgaccagctgtccgcg
atcaagcgtctgatgaagggcctcaacatcgacgacgaaaagtacccggcgaaaaatctc
cagtacttcatcaacaacgcgaaagaacaaggtctgcgcccaaaagacgtcgacgccacc
gacaacttcaaccgcaaattcgtcgaactctacgaagcctacgaccagcaatgccagcgc
gaaggcgtcgtcgactttccggaactgctgctgcgctgctacgaactgctcgcgcacaat
ccgccgttgcgcgcccactaccaggcgcgcttccggcatattctggtcgacgagttccaa
gacaccaacaagctgcaatacgcctggctcaagatgctggcgggccagaccaactcgatc
ttcgccgtcggcgacgacgatcagtcgatctacgcgtttcgcggcgcgaacgtcggcaac
atgcgcgacttcgaacacgagttcaacgtccgtcatctgatcaagctggagcagaactac
cgctcgcacggccatattctcgacgccgccaatcagctcatcgccaacaattcgcgccgt
ctgggcaagaatctgcgtaccgacgcgggccacggcgaaccggtccgcgtgtatgaatcc
gcgactgattcgcaggaagccagctggatcgtcgaggaaatcaaggcgctgatcagcacc
ggcacgtcgcgcagcgaaatcgcgattctctaccgcagcaacgcgcagtcgcgcacgatc
gaacacacgctggtcaacgcgggcatcgcgtatcgcgtgtacggcggcttgcgctttttc
gagcgccaggaagtcaagcacgcgctcgcctatctgcgcctgatcgacaatccgaacgac
gacaccgcgttcgcgcgcgttgtcaattttccgacacgcggcatcggcgcgcgctccatc
gagcaactcgcggacgcggcgcgtctgtacaactgctcgatggccgcagcgattccgtac
gtggcgggcaaggcgggttcgagcctcgcggccttcgcgaacctggtcggcaagatgcgc
gcggaaacgcagcagatgagcctgccggaaaccgtcgaatacgtggtgcgcacgagcggt
ctctcggagttctatcagaacgaacgcgaaggccaggaccggctcgagaacttgcaggaa
ctggtcaacgcggccgccgcgttcgtcagcgaagagggctacggcatggacacgccggcg
cgctccattccgctgcgtccgggcgcgaccgccgcgcccgaactggccgtcgccaccgac
gatccgaataccgtcgtgctcgacgcccccggcattgccgacccggcgcaaaacccggac
acgatgacgccgctcgccggtttcctgtcacacgcatcgctggaggcgggcgacaatcag
gcgcaagccggccaggaagccgtgcaactgatgacggtgcacgcggcgaagggcctcgag
ttcacggcggtgttcatcaccggtctggaagaggggctgttcccacacgaaaacagcgcg
atggaatcggacggcctggaagaggagcgccgcctgatgtacgtggcaatcacgcgcgcc
aaggagcggttgtatctgtcgttcgcgcagagccgcatgctgcatggtcagacgcgttac
aacatccgttcgcgtttcttcgacgaactgccgcaggaaacgctcaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggccgctccgacaacgcgggttatgggcgcgac
tggttcgcgcggccgggttatacggggcccgcatcgtccacgcccgcgcagttgcccgcg
ttcgcgaacgagcagcgtgcggcggaaacgggtttccgcgtcggccagcaagtgttccac
accaagttcggcgaaggcacgatcaccgcgctcgaaggcggcggcgccgacgcgaaagca
caggtcaaattcaagcggcacggcgagaaatggctggcgctcgcggtcgctaaattgcag
gcggtggaatga
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integrated database retrieval system
