Paraburkholderia phytofirmans PsJN: Bphyt_3023
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Entry
Bphyt_3023 CDS
T00765
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00630
Glyoxylate and dicarboxylate metabolism
bpy00680
Methane metabolism
bpy01100
Metabolic pathways
bpy01120
Microbial metabolism in diverse environments
bpy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphyt_3023
09102 Energy metabolism
00680 Methane metabolism
Bphyt_3023
Enzymes [BR:
bpy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Bphyt_3023
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_9
Fer4_NDSU1
Fer4_Nqo3
Fer4_15
Fer4_2
Fer4_18
Fer4_16
Fer4_4
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
ACD17415
UniProt:
B2T651
LinkDB
All DBs
Position
1:3408131..3411079
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AA seq
982 aa
AA seq
DB search
MSDVLNSPTGGCGSGNCACKSQAQQQRAPRSFFDDTDFGTPERHADIDITLEIDGQSVTV
PAGTSVMRAAVEAGVNVPKLCATDSLEPFGSCRLCLVEIEGKRGYPASCTTPVEAGMKVR
TQTDRLQSLRRNVMELYISDHPLDCLTCPANGDCELQDMAGVTGLREVRYGFDGANHLKD
KKDESNPYFTYDASKCIVCNRCVRACEETQGTFALTIAGRGFESRVAASENVPFMESECV
SCGACVAACPTATLQEKTVIMLGQAEHSVVTTCAYCGVGCSFKAEMKGNEVVRMVPHKNG
QANEGHACVKGRFAWGYATHKDRITKPMIRAKITDPWREVSWEEALTYAASEFRRIQAKH
GRDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQ
TFASVDKADVIMVIGANPTDGHPVFGSRLKRRVREGAKLIVVDPRRIDIVDTPHVKASHH
LQLRPGTNVAVVNALAHVIVTEGLVNEAFVAERCETRAFEQWRDFVALPENAPEATEAVT
GVPAQFVREAARIYATGGNAAIYYGLGVTEHAQGSTMVMGIANLAMATGNIGREGVGVNP
LRGQNNVQGSCDMGSFPHELPGYRHISDTVTRTLFEDAWNVTLQPEPGLRIPNMFDAAVH
GTFKGLYCQGEDIVQSDPNTHHVSAALSSMECIVVQDIFLNETAKYAHVLLPGSSFLEKD
GTFTNAERRISRVRKVMPPVPGYADWEVTVMLSRALGYEMDYTHPSQIMDEIARLTPTFH
GVSYKKLDEMGSIQWPCNEDAPDGTPTMHIDSFVRGKGKFVITKFIATPEKVTRKFPMLL
TTGRILSQYNVGAQTRRTENSRWHDEDRLEIHPHDAEERGIKTDDWVGIESRAGQTVLRA
KVTERMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPVEQPSQWQKEYS
RFNTEQLDLLKQRELANATSGK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtgctcaactctcccactggcggctgcggttccggcaactgcgcgtgtaaa
tcgcaggcgcagcaacagcgcgcgccccgctccttcttcgacgacaccgatttcggcacg
cccgagcgtcacgccgatatcgacatcacgctggaaatcgacggccagtccgtcaccgtt
cccgccggcacctcagtcatgcgcgccgccgtcgaagcgggcgtcaacgtaccgaagctc
tgcgcaaccgattcgctggaaccgttcggctcgtgccgtttgtgtctggtggaaatcgaa
ggcaagcgcggttatcccgcttcgtgcacgacgccggtcgaagccggcatgaaagtccgc
acgcaaaccgatcgtctgcagtcgttgcgccgcaatgtgatggagttgtatatctccgat
cacccgctcgactgcctcacctgccccgccaacggcgactgtgaactgcaggacatggcg
ggcgtaacgggtttgcgcgaagtgcgctacggcttcgacggcgcgaatcacctgaaggac
aagaaagacgagtcgaatccgtacttcacctacgacgcgtccaagtgcatcgtctgcaat
cgctgcgtgcgcgcgtgtgaggaaacgcaaggcacattcgcgctgaccatcgccggacgt
ggtttcgaatcgcgcgtggcggccagcgaaaacgtgccgttcatggaatcggaatgcgtg
tcgtgcggcgcgtgcgtggccgcgtgcccgaccgctaccttgcaggaaaagaccgtcatc
atgctcggtcaggccgagcattcggtcgtcaccacctgcgcgtattgcggcgtcggctgc
tcgttcaaggcggagatgaagggcaacgaggtcgtgcggatggtgccgcacaagaacggc
caggccaatgaaggccacgcctgcgtgaagggccgctttgcctggggctacgcgacgcac
aaggaccgcatcaccaagccgatgattcgcgcgaagatcaccgatccgtggcgcgaagtc
agttgggaagaagcgctcacgtatgcggcctcggaattccgccgcattcaggccaagcat
gggcgcgattcgatcggcggcattacgtcgtcgcgttgcacgaacgaagaaacgtacctg
gtgcaaaagctcgtgcgcgcggcgttcggcaacaacaacgtcgacacctgcgcgcgcgtt
tgccactcgccgactggctatggactgaagaccacgctcggcgaatcggcgggcacgcag
acttttgcgtccgtggataaggccgacgtgattatggtgatcggcgcgaatccgaccgac
ggccatccggtgttcggctcgcgtctgaagcggcgtgtgcgtgaaggcgcgaagctgatc
gtcgtggatccgcggcgcatcgatatcgtcgatacgccgcacgtgaaggcctcgcatcat
ctgcaattgcggccgggcaccaacgtggccgtcgtgaatgcgctggcgcacgtgatcgtc
accgaaggcctcgtcaatgaagcgttcgtcgccgagcgctgcgaaacgcgcgcgttcgag
cagtggcgcgatttcgtcgcgctgccggagaacgcacccgaggcaaccgaggctgtgacc
ggcgtgccggctcaattcgtgcgcgaagccgcccgcatctatgcgaccggcggcaacgcc
gcgatctactacggcctcggcgtcaccgaacacgcgcaaggttcgacgatggtgatgggc
atcgccaacctcgcgatggcgacgggtaacatcggtcgcgaaggcgtgggcgtgaatccg
ctgcgcggccagaacaacgtgcagggctcgtgcgacatgggctcgttcccgcacgaactg
ccgggctatcgccacatcagcgacacggtcacgcgcacgctgttcgaagacgcctggaac
gtcacgctgcaaccggaaccgggcctgcgcattccgaacatgttcgacgccgccgtgcac
ggcaccttcaaggggctgtactgccagggcgaagacatcgtgcagtcggatccgaatacg
catcacgtatcggccgcgttgtcgtcgatggaatgcatcgtcgtgcaggatattttcctg
aacgagactgccaagtatgcgcacgtgttgctgccgggttcgtcgttcctcgaaaaggac
ggtacgttcaccaacgcggaacgccgcatttcgcgcgtacgcaaggtcatgccgccggtg
ccgggttacgccgactgggaagtcacggtgatgctctcgcgcgcgctcggctatgaaatg
gactacacgcacccgtcgcagatcatggacgagatcgcgcgtctcacgcccactttccac
ggcgtctcgtacaaaaagctcgacgagatgggcagcattcagtggccttgcaacgaagat
gcaccggacggcacgccgaccatgcacatcgacagtttcgtgcgcggcaagggcaagttc
gtgatcaccaagttcatcgcgacgcccgagaaagttacgcgcaaatttccgatgctgctc
actacgggccgtatcctgtcgcagtacaacgtgggcgcgcaaacccgccgcaccgagaac
tcgcgctggcacgacgaggaccggctggaaatccatccgcatgacgccgaagagcgcggc
atcaagaccgacgactgggtcggcatcgaatcgcgcgcgggacaaaccgtgttgcgcgcg
aaggtgacggagcgcatgcaaccgggcgtcgtttatacgacattccactttcctgagtcg
ggcgcgaacgtgatcaccaccgatagctcggactgggcgaccaactgtccggagtacaag
gtgaccgcggtgcaggtaatgccggtcgaacagccgtcgcaatggcagaaagagtattcg
cgtttcaacaccgaacagctcgatctgctgaagcaacgcgagttggccaacgcgacatcg
ggcaagtga
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