Paraburkholderia phytofirmans PsJN: Bphyt_3077
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Entry
Bphyt_3077 CDS
T00765
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03030
DNA replication
bpy03430
Mismatch repair
bpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bphyt_3077
03430 Mismatch repair
Bphyt_3077
03440 Homologous recombination
Bphyt_3077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpy03032
]
Bphyt_3077
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_3077
Enzymes [BR:
bpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bphyt_3077
DNA replication proteins [BR:
bpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bphyt_3077
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bphyt_3077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACD17469
UniProt:
B2T6A5
LinkDB
All DBs
Position
1:complement(3470741..3471892)
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AA seq
383 aa
AA seq
DB search
MSEQFLPEPALDGPIVFVDLETTGGSTAEHRITEVGVVEIGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFDVIAPELFKRLNGKLFVAHNASFDRGFLRGEFRRVGLAFDP
DVLCTVRLSRALFPAEKRHGLDALVERHALVPSDRHRALADADLIWQFWQRLHGLVPLDV
LRTQIERTTRRYRLAGDITEDLLDTAPAGCGVYAFYGEEDLPLYVGRSVRVRQRLRSHLT
GERRSSKDIRLAQQVRRVEWRATGGELGAMLAEAQWIATLRPGHNRVPRVAKSDPADAPW
PFDGPIVFEEREEASQARAFHVVDRWCYVGHAASLALAAELHASSAAGPFELSTYRILQS
HLARGLRVMPLSVPIGAAVASLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtttttgccggaaccggccctggatgggccgatcgtcttcgtcgacctt
gaaaccacgggcggttcgaccgccgagcatcgcattaccgaggtgggcgtggtcgaaatc
ggaccagccggcgtgtcgcgctggagcagtctggtcgaccctcagcagccgattccctca
ttcatccagcagctcaccggcatcacgaatgcgatggtgcggggcgcgccgaccttcgac
gtgatcgcgccggagctgttcaagcgtttgaacggcaaactgttcgtcgcgcataacgcc
agctttgatcgcggatttctgcgcggcgagtttcgccgggtcggactggcgttcgatccg
gacgtgctgtgcaccgtgcgcctgtcgcgcgcgctgttcccggcggagaagcgtcacggt
ctcgacgctctggtcgagcgtcacgcgctcgtgccgtccgatcgccaccgcgcgctcgcc
gacgccgatctcatctggcagttctggcaacgtctgcacggcctcgtgccgctcgacgta
ttgcgtacgcagatcgagcgcaccacgcggcgctaccggcttgcgggtgacatcaccgaa
gatctgctcgataccgcgccggccggctgcggcgtctatgcgttctatggggaagaggat
ttgccgctgtatgtcgggcgaagcgtgcgcgtgcgtcagcggcttcgctcgcatttgact
ggcgagcggcgctcctccaaagatatccggcttgcgcagcaggtgcggcgtgttgaatgg
cgcgcgaccggcggcgaattgggcgccatgctcgcggaggcgcagtggatcgcgacgctg
cgccccggccataaccgggtgccgcgtgtcgcaaagagcgatcctgctgacgcgccctgg
ccgttcgacgggccgatcgtattcgaggagcgtgaggaggcgtcgcaggcgcgcgcgttt
cacgtcgtcgaccgttggtgttacgtgggccacgcggcatcgctcgcgctggcagcggag
ttgcatgcatcgagcgcggcgggtccgttcgagttgtcgacctatcgcatcttgcagagc
catctcgcccgcggtttgcgtgtgatgccgttgagcgtgccgattggagcggcggtggcg
agtcttgcctga
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