Paraburkholderia phytofirmans PsJN: Bphyt_3211
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Entry
Bphyt_3211 CDS
T00765
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00061
Fatty acid biosynthesis
bpy00071
Fatty acid degradation
bpy01100
Metabolic pathways
bpy01212
Fatty acid metabolism
bpy02024
Quorum sensing
bpy04146
Peroxisome
Module
bpy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bphyt_3211
00071 Fatty acid degradation
Bphyt_3211
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bphyt_3211
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphyt_3211
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpy01004
]
Bphyt_3211
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpy04147
]
Bphyt_3211
Enzymes [BR:
bpy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bphyt_3211
Lipid biosynthesis proteins [BR:
bpy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bphyt_3211
Exosome [BR:
bpy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bphyt_3211
Exosomal proteins of breast cancer cells
Bphyt_3211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACD17603
UniProt:
B2SY68
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All DBs
Position
1:3619157..3620719
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AA seq
520 aa
AA seq
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MSFDSPTRSTIDIPALLAALPERIADIPALAAARDPQHIAVIEDARRLTSAQLLEAVDAA
TALLREWGVRGGDRVMIVAENSIVQIVLLFATARLDAWALVSNARLSAAELDSIRAHAQP
RIVAYATESSADAKLHAERHHAAKAPAFTPDIGAWSYTVDSAAVAEPVEAASERQCAALI
YTTGTTGAPKGVMLSHRNLLFIAAISSRLRKVGPDDVVYAVLPISHVYGFASVCLGSLHA
GATLRLVPRFAPEAVRRALADERVSIFQGVPAMHAKLLEHLQTHGHAWSAPHLRFAYSGG
SPLDAALKAQVESVCGLPLHNGYGMTESSPTVSHTMLDAPRSDCSVGEVIPGVEVRFVGL
DGIDAAQGDIGELWVRGPNVMLGYYRSLEQTRAAVTEDGWLKTGDLARQDADGALHIVGR
SKELIIRSGFNVYPAEVEHVLNAHPQVVQSAVIGRAVEGNEEVVAFVELLTGATVTPAEL
IDCCGERLAPYKRPAEVKVLAALPAASTGKILKHRLREFL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgagcttcgattcgcccacccgttccacgatcgacatccccgcattgctggcggccctg
cccgaacgcatcgccgacattccggcgctggccgccgcgcgcgatccgcagcacatcgcc
gtgatcgaggatgcgcgccgcctcaccagcgcgcaactgctggaggccgtcgacgccgcc
actgcgctgctgcgcgaatggggcgtacgcggcggcgatcgcgtgatgatcgtcgcggaa
aacagcatcgtgcagatcgtgctgctgttcgcgaccgcccggctcgacgcatgggcgttg
gtctcgaacgcgcgcctgtcggccgctgaactcgactcgatccgtgcgcacgcgcagcct
cgcatagtcgcctacgccacggaaagctcggccgacgccaagctgcatgcagagcgccat
cacgccgccaaggcgcccgccttcacgccggacatcggcgcctggtcgtacacggtggac
agcgcggccgtcgccgagccggtcgaagccgcaagcgagcgccagtgcgccgcgttgatt
tacaccacaggcaccaccggcgcgcccaagggcgtgatgctgtcgcaccgcaatctgctg
ttcatcgccgcgatctcgagccgcttgcgcaaagtcggccccgacgatgtcgtctatgcc
gtgctgccgatctcgcacgtctacggtttcgcgtccgtctgtctgggcagcctgcatgcg
ggcgcgaccttgcggctagtgccgcgcttcgcgccggaagccgtgcgccgcgccctcgcc
gatgagcgcgtgtcgattttccagggcgtgccggccatgcacgccaaactgctcgaacat
ctgcagacacacggtcacgcatggtccgcgccgcacttgcgtttcgcctattcgggcggc
tcgccgctcgacgccgccttgaaagcgcaggtggaaagcgtctgcggtctgccgctgcac
aacggctacggcatgaccgagagcagcccaaccgtgtcgcacaccatgctcgatgcgccg
cgcagcgattgctccgtcggcgaggtcattccgggcgtcgaggtgcgtttcgtcggactc
gacggcatcgatgccgcgcagggcgacatcggcgagctatgggtgcgcggccccaacgtg
atgctgggctactaccgcagcctggagcagacccgtgcggccgtcaccgaagacggttgg
ctcaaaaccggggatctcgcaaggcaggacgcggacggcgcgttgcatatcgtcgggcga
agcaaggaattgatcattcgctcgggcttcaacgtgtacccggccgaagtcgaacatgtg
ctgaacgcgcatccgcaagtcgtgcaatcggcggtgatcggacgcgcggtggaaggcaac
gaggaagtggtcgcgttcgtcgagttgcttacgggcgcgacggtgacgcccgccgaattg
atcgattgttgcggcgagcgtctcgcgccatacaaacggccggccgaagtcaaagtgctc
gccgcattgccggcggcatcgacgggcaagattctcaagcaccggctgcgcgagtttctt
tga
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