Paraburkholderia phytofirmans PsJN: Bphyt_3378
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Entry
Bphyt_3378 CDS
T00765
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03030
DNA replication
bpy03430
Mismatch repair
bpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bphyt_3378
03430 Mismatch repair
Bphyt_3378
03440 Homologous recombination
Bphyt_3378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpy03032
]
Bphyt_3378
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_3378
Enzymes [BR:
bpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bphyt_3378
DNA replication proteins [BR:
bpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bphyt_3378
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bphyt_3378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Spore_SspJ
Motif
Other DBs
NCBI-ProteinID:
ACD17769
UniProt:
B2SYN4
LinkDB
All DBs
Position
1:complement(3807314..3808432)
Genome browser
AA seq
372 aa
AA seq
DB search
MQLRLDALEAHFAKGLAGLYVVYGDEHLLAQEACDRIRATARAAGFTDRSVFTVERGFDW
SSLLGASQSMSLFGDRQLVELRIPSGKPGKEGADALKALAAAVNDDVLTMITLPRLDVAT
QKSAWFTALSDAGVALKIDPVERAQLPNWVGQRLAAQGQRVAAGEEGRRALAFIAERVEG
NLLAAHQEIQKLGLLYPAGSLSFEQVQDAVLNVARYDVFKLNEAMLAGDVGRLSRMLDGL
RGEGEAAVLVLWAVVEEVRTLLRIKRGVAAGKALAMLVRENRVWGPRERLIGPALSRVSE
GALEKALALAARLDRQVKGLSGGTPGNHRNDPPPDPWDGLFELAMTVASPKTAPVPPPRP
RSLTAAPARRPV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgacttgacgcgcttgaagcgcatttcgccaaaggactcgccggactgtac
gtcgtgtacggcgacgagcacctgctcgcgcaggaagcgtgcgaccgcattcgcgccacg
gcgcgcgcggccggctttaccgatcgttcggtgttcacggtggagcgcggtttcgactgg
agttcgctgctgggcgcgagccagtcgatgtcgctgttcggcgaccggcaactggtcgag
ctgcgcattccatcaggcaagcccggcaaggaaggcgcggacgcgctgaaagcgctcgcg
gctgccgtcaacgacgacgtgctcaccatgatcacgctgccgcggctcgacgtggccacg
cagaagtcggcgtggtttacggctttgtccgatgcgggcgtcgcgttgaagatcgatccg
gtcgagcgcgcgcagttgccgaattgggttgggcagcggctcgccgcgcaaggccagcga
gtcgccgcaggcgaagaagggcggcgcgcgctggcgttcatcgccgagcgcgtggaaggc
aatctgctcgccgcgcatcaggaaatccagaagctcgggctgctgtatccggcgggttcg
ttgagcttcgaacaggttcaggacgccgtgctcaacgtcgcccgttacgatgttttcaag
ctgaacgaagcgatgctggcgggcgatgtaggccgcttgtcgcgcatgctcgacggcttg
cgtggcgaaggcgaggccgcggtgctggtgctatgggccgtggtcgaagaagtgcgcacg
ctgctgcggatcaagcgcggcgtagcggccggcaaggcgcttgcaatgctggtgcgcgag
aaccgcgtgtggggtccgcgtgagcggctgatcggcccggccttgtcgcgcgtgagcgaa
ggcgcgctggaaaaggcgctcgcgctggcggcgcggctcgatcgtcaggtgaaggggttg
tcgggcggaacgccgggcaatcatcgcaacgatcctccgcctgatccgtgggacggtctg
tttgaactcgccatgacggtggcttcgccgaagacggcgcccgtgccgccgccacgacct
cgaagcttgacagctgcgccggcgcgaaggcctgtctga
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