Paraburkholderia phytofirmans PsJN: Bphyt_3396
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Entry
Bphyt_3396 CDS
T00765
Name
(GenBank) guanine-specific ribonuclease N1 and T1
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpy03019
]
Bphyt_3396
03016 Transfer RNA biogenesis [BR:
bpy03016
]
Bphyt_3396
Enzymes [BR:
bpy01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
Bphyt_3396
Messenger RNA biogenesis [BR:
bpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bphyt_3396
Transfer RNA biogenesis [BR:
bpy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Bphyt_3396
Prokaryotic type
Bphyt_3396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
ACD17787
UniProt:
B2SYP8
LinkDB
All DBs
Position
1:complement(3826034..3826450)
Genome browser
AA seq
138 aa
AA seq
DB search
MARKWQRMKGVLIGAITLCVLSGPVPGAFARDSTAPVDANAQLQGTIALAQLPREAVNTL
NLIAAGGPYPYEKDGIVFGNRERLLPAHRRGYYHEYTVPTPRSRNRGARRIVCGGPLKRT
DNCYYSDDHYTSFNRIVE
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagtggcaacgcatgaaaggcgtgctgatcggtgctattacgctgtgcgtt
ttatccggccccgtgccaggcgcgttcgcgcgcgactccacggcacccgtcgacgcgaac
gcgcagttgcagggcaccatcgcgctggcgcagttgccgcgcgaagcggtcaatacattg
aacttgattgccgcaggcgggccttacccgtatgagaaggacggcatcgtattcggcaat
cgcgaacggttgctgccggcccatcggcgcggctattaccacgaatacaccgttcccacg
cctcgctcacgtaatcgcggggcgcgtcgcatcgtctgcggaggtccgctgaagcgaacc
gacaattgttactactcggacgaccactacaccagttttaatcgtattgttgaatga
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