Paraburkholderia phytofirmans PsJN: Bphyt_3501
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Entry
Bphyt_3501 CDS
T00765
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphyt_3501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_3501
Enzymes [BR:
bpy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bphyt_3501
DNA repair and recombination proteins [BR:
bpy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bphyt_3501
Prokaryotic type
Bphyt_3501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACD17891
UniProt:
B2SZ06
LinkDB
All DBs
Position
1:3945300..3946061
Genome browser
AA seq
253 aa
AA seq
DB search
MTTTQPQQSGASAPPPTLEAQFDALPPAWRTHLKPFIESDAYAPLCRFVDGERAAGKTVY
PADVFRALRLTSPDDVKVVILGQDPYHGEDRGTPQAHGLAFSVAPNVRTPPSLRNIFKEI
AASLGHETPRHGCLDTWAKQGVLLLNTVLTVERDSAASHAKRGWEKCTDTLIHELAMRHD
GLVFMLWGAHAQAKRALLGGKSHCVLEAPHPSPLSAHRGFLGCGHFAKANDYLAQHGREP
IDWRLPDEAQMLA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacccagccgcagcaatccggcgcgagtgcgccgccgccgacgctcgaagcg
caattcgatgccctgccgcccgcatggcgcacgcatctcaaaccgttcatcgaaagcgac
gcctacgcgccgctctgccgtttcgtcgatggcgaacgcgccgccggcaaaaccgtctat
cccgccgacgtgttccgcgcgctgcgtctgaccagtcccgatgacgtcaaagtcgtcatc
ctcggccaggacccgtaccacggcgaagaccgcggcacaccgcaagcgcacggactcgca
ttctccgtagcgccgaacgtgcgcacgccgccgtcgctgcgcaatattttcaaggagatc
gccgccagcctcggccacgagacgccgcgtcacggctgtctcgacacatgggcgaagcaa
ggcgtgctgctgctgaatacggtgctgaccgtcgagcgtgactcggccgccagccacgcg
aaacgcggctgggaaaaatgcaccgacacgctgatccatgaactggccatgcgccatgac
ggcctggtgttcatgctatggggcgcgcatgcgcaagccaagcgcgcgctgctcggcggc
aagtcgcattgcgtgctggaagcgccgcatccgtcgccgctgtcggcgcatcgcggtttt
ctcggttgcgggcatttcgcaaaggccaacgactatctcgcgcagcatggccgtgaaccg
atcgactggcgtttgcccgacgaagcgcaaatgctcgcgtaa
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