| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
bpy Paraburkholderia phytofirmans PsJN
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bpy00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bphyt_3651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bpy03021]
Bphyt_3651
03400 DNA repair and recombination proteins [BR:bpy03400]
Bphyt_3651
Enzymes [BR:bpy01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bphyt_3651
Transcription machinery [BR:bpy03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bphyt_3651
DNA repair and recombination proteins [BR:bpy03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bphyt_3651
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(4082271..4086509)
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| AA seq |
1412 aa
MKALLDLFKQVQQPEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVEMLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPDWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNAKGEGLTFTGVSEALRAYENK
EVELASRVNVRITEMVHNEDKSEGAPAFVPKITLYPTTVGRAILSEILPPGLPFSVLNKP
LKKKEISRLINTAFRKCGLRETVIFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTSQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVTVADVVNPESQETLYETGTLLDEDAVEEIERLGIDEVRVRTPLTCETRYGLC
AACYGRDLGRGSSVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTATMRYVTNAKGEQIVISRSGEAMITDDHGRERERHKVPYGATLLQLDGAQIKAG
TQLATWDPMTRPIITEWGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKT
VRPQVKLLDANGEEVKIPNTEHSVQIGFQVGALITVKDGQQVQVGEVLARIPVESQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLDGNQHEFLIAKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPATYENVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKSKEL
SDRERFDQIAAEESFEFGTPETPAAEQQHSGE |
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| NT seq |
4239 nt +upstreamnt +downstreamnt
atgaaagctctgctcgatctattcaagcaagtccaacagcctgaagtttttgacgcgatc
aagatcggtctggcttcgccggacaagatccgttcgtggtcgttcggtgaagtgaagaag
ccggaaaccatcaactaccggacgttcaagccggaacgcgatggtttgttctgcgcgaag
atcttcgggccgatcaaagactacgaatgcctttgcggcaagtacaagcgcctgaagcat
cgtggcgtgatctgcgagaagtgcggcgttgaagtgacgctggcgaaagtgcgtcgcgaa
cgcatgggccacatcgaactggcctcgccggttgcgcacatctggtttttgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcctatgtggtgatcgatccgggcatgacgccgctgaaagcgcggcagatcatg
accgaagaggattactacaacaaggtcgaagaatacggtgacgaattccgtgccgagatg
ggcgcggaaggcgtgcgcgaattgctgcgcgcgatcaacatcgacgaacaggtcgagatg
ctgcgcaccgaactcaagaacacgggttcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtgctcgaggctttccaacgttcgggcatcaagcctgactggatggtgctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctggtgccgctcgatggcggccgcttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcgcctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgattcgctgctcgacaacggtcgtcgcggtaaggccatgaccggcgcgaac
aagcgtccgttgaagtcgctcgccgacatgatcaagggtaagggcggtcgtttccgtcag
aacttgctcggtaagcgcgttgactactcgggccgttcggtgatcgtggtcggcccgacg
ctcaagctgcatcagtgcggtctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctcgaagtgatgggtgtcgctaccaccatcaaggctgcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacattctcgaagaagtcattcgcgaacatccg
gtcatgctgaaccgtgcgcctacgctgcaccgtcttggcattcaggctttcgagccggtg
ctcatcgaaggtaaggcaatccagctgcacccgctcgtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgtgccgctgtcgctggaagcgcagatggaagcg
cgcacgctgatgctggcgtcgaacaacgtcctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctcggtctgtactacgcgacccgtgaagcagtgaacgca
aagggcgaaggcctgacgttcaccggcgtttcggaagcgctgcgtgcctacgagaacaag
gaagtcgagctcgcctcgcgcgtcaacgtgcggatcaccgaaatggtccacaacgaagac
aagtcggaaggtgcgccggcgttcgtgccgaagatcacgctgtacccgaccaccgtcggc
cgtgcaatcctgtcggaaatccttccgccgggcctgccgttctcggtgctcaacaagccg
ctgaaaaagaaggaaatctcgcgcctcatcaacaccgcgttccgcaagtgcggtctgcgt
gaaacggtgattttcgccgaccagttgatgcagtcgggtttccgtctggcaacgcgcgct
ggtatctcgatctgcgtcgacgacatgctcgtgccgccgcagaaggaaaccatcgtcggc
gacgccgcgaagaaggtgaaggaatacgaccgtcagtacatgtcgggtctcgtcacgtcg
caagagcgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggagcagctgtcgacggaaccggtcacggatcgcgacggcaacgaaacgcgt
caggaatcgttcaactcgatctacatgatggcggactcgggtgctcgtggttccgcggtt
cagattcgtcagctggccggtatgcgtggcctgatggcgaagccggacggctcgatcatc
gagacgccgattacggcgaacttccgtgaaggcctgaacgtgttgcagtacttcatctcg
acccacggcgcacgtaagggtctggctgatacggcactgaagacggcaaactcgggttac
ctgacgcgtcgtctggttgacgtgacgcaggatctggtggtggtcgaggacgattgcggt
acgtccaacggcgtcgcgatgaaggcgttggtcgaaggcggggaagtcgtcgaagcgctg
cgtgaccgtatcttgggtcgcgtgacggtggctgacgtcgtcaatccggaatcgcaggaa
acgctgtacgaaacgggcacgttgctcgacgaagatgcggtcgaagaaatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgtacgccgctgacttgcgaaacgcgttacggtctgtgc
gcagcctgctacggccgcgacctgggccgcggctcgtcggtcaacgtcggtgaagcagtc
ggcgtgatcgctgcgcagtcgattggcgaaccgggcacgcagctcacgatgcgtacgttc
cacatcggtggtgcggcgtcgcgcgcggcagtggcttcgtcggttgaagcgaagtcgaac
ggtacggtgcgtttcacggcaacgatgcgttacgtcaccaacgcgaagggcgagcagatc
gtcatctcgcgttcgggcgaagcaatgatcaccgacgaccacggtcgcgagcgcgaacgt
cacaaggtgccgtacggcgcgacgctgttgcaactggacggcgcgcagatcaaggccggc
acgcaactggcaacgtgggatccgatgacgcgtccgatcatcaccgagtggggcggtacg
gtgaagttcgaaaacgtcgaagaaggcgtgaccgttgcgaagcagatcgacgatgtgacg
ggtctgtccacgctggtcgtgatcgacgtgaagcgtcgtggttcgcaagcttcgaagacg
gtgcgtccgcaggtcaagctgctcgatgcgaacggcgaagaagtcaagatcccgaacacc
gagcactcggtgcagatcggcttccaggtcggcgctctgatcaccgtgaaggacggtcag
caagtgcaggtcggtgaagtgctggcacgtatcccggtcgaatcgcagaagacgcgtgac
attaccggtggtctgccgcgtgtggccgagctgttcgaagcgcgttcgcctaaggacgca
ggtatcctggcggaagtcacgggtacgacgtcgttcggtaaggacacgaagggcaagcag
cgtctcgttatcacggacctcgacggcaatcagcacgagttcctgatcgcgaaggaaaag
caggtcctagtgcacgatggtcaggtcgtcaacaagggcgaaatgattgtcgacggtccg
gccgatccgcacgacatcttgcgtctgcaaggtatcgaagcgctgtcgcgttacatcgtg
gacgaagtgcaggacgtgtaccgtctgcaaggcgtgaagatcaacgacaagcacattgaa
gtgattgttcgtcagatgctgcgtcgcgtgcagattacggacaacggcgatacgcgtttc
atcccgggcgaacaggtcgagcggtcggatatgctcgacgagaacgaccgtatgatcgcg
gaagacaagcgtccggcaacgtacgaaaacgtgctgctcggtatcacgaaggcctcgttg
tcgaccgattcgttcatctcggcggcgtcgttccaggaaacgacccgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgacctgcgtggtctgaaggaaaacgtgatcgtcggc
cgtctgattccggccggtacgggtctcgcgttccacaaggcgcgcaagagcaaggaactg
tccgaccgcgagcgtttcgatcagatcgcagcggaagagtcgttcgaattcggtacgccg
gaaaccccggccgccgaacagcagcactcaggcgagtaa |
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