Entry |
|
Name |
(GenBank) AlkA domain protein
|
KO |
|
Organism |
bpy Paraburkholderia phytofirmans PsJN
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bpy00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphyt_3954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:bpy03400]
Bphyt_3954
Enzymes [BR:bpy01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Bphyt_3954
DNA repair and recombination proteins [BR:bpy03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bphyt_3954
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(4429605..4430522)
|
AA seq |
305 aa
MSTLDEVATLELPFKPPFDWPRLLRFFGGRATPGVEAVEDGAYRRAIAWAGDSGTLSVRQ
HPRKRCLVASMEGPVSRHADALAAPIAKMFDLHADPKKIGAELAADPWLAPLVEAVPGLR
VPGAWSGFELVVRAIVGQQVSVKAATTIIGRLVQRAGERIEGHPHENTAWRFPTPAALAA
VDLAQIGMPGKRVAALQGFAHAVATGDVPLDSNTADAGSLRAALLALPGIGPWTVEYVAM
RAWRDADAWPAWDLVLMQSICARDPSLVRPTQQRARTDTWRPWRAYAAMHLWNEVADRAG
AARGG |
NT seq |
918 nt +upstreamnt +downstreamnt
gtgagtacgcttgacgaagtcgctacccttgaattgccgttcaaaccacctttcgactgg
ccgcgcctgctgcgtttcttcggcggacgcgcgacgcccggcgtcgaagcggtggaagac
ggcgcgtaccgtcgcgcgatcgcctgggccggcgacagcggcacgctgagcgtgcgtcag
catccacgcaagcgttgcctggtcgcgagcatggaagggccggtgagccgtcacgccgac
gcactcgccgcgccgattgcaaagatgttcgacctgcacgccgatccgaaaaagatcggc
gcagaactcgccgctgacccatggctcgcgccactggtcgaagccgtgcccggcttgcgc
gtgccgggcgcgtggtcgggcttcgagctggtggtgcgcgcaatcgtcgggcagcaggtc
agcgtgaaggcggcgaccactatcatcggcagactggtgcagcgcgcgggcgagcgcatc
gaggggcatccgcatgagaacaccgcctggcgttttccgacgcccgccgcgctggccgcc
gtggatcttgcgcaaatcggcatgccgggtaaacgtgtagcggcgttgcagggtttcgcg
cacgcggtcgccaccggtgatgtgccgctcgacagcaacacggccgacgccggcagtctg
cgcgccgcgctgctcgcgctgcccggcatcggcccgtggaccgtcgagtatgtggccatg
cgcgcatggcgcgatgccgacgcgtggcccgcatgggacctcgtgctgatgcagtcgatc
tgcgcgcgcgatccgtcgctcgtgcggcccacgcagcagcgcgcccgcaccgacacatgg
cggccgtggcgtgcgtacgcggcgatgcatctgtggaatgaagtagcggaccgcgcgggc
gccgcgcgtggcgggtaa |