Paraburkholderia phytofirmans PsJN: Bphyt_4560
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Entry
Bphyt_4560 CDS
T00765
Name
(GenBank) proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00470
D-Amino acid metabolism
bpy01100
Metabolic pathways
Module
bpy_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bphyt_4560
Enzymes [BR:
bpy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
Bphyt_4560
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Motif
Pfam:
Pro_racemase
DAP_epimerase
PhzC-PhzF
CsoS2_M
Motif
Other DBs
NCBI-ProteinID:
ACD18933
UniProt:
B2TD19
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All DBs
Position
2:635819..636844
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AA seq
341 aa
AA seq
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MTMPKSSQSTRKHTKTRTPAVSTMGIMKTLDIIDSHTGGEPTRLVVSGGPDLGGGTLAQR
LDVFRTQFDDWRAGIVTEPRGSDVVVGALLCEPDDPTCAAGVIFFNNVGYLGMCGHGTIG
LVVSLAHLGRIGAGRHRIETPVGIVEATLNDDGSVAVRNVPAYRYRRSVQVDVPGHGVLT
GDIGWGGNWFFLVADHGRVLEASRIGELTTFSGAIRDALIAQHITGADGALIDHIELFGP
GSRDGLDSRSFVLCPGSAYDRSPCGTGTSAKVACLAADGKLAEGAVWRQESIIGSVFEAS
YRHAGDGVHVIPTITGHAYITAEARLCFDERDPFAWGIPAA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgactatgccgaaatcgtcacaatccacgcgtaagcacaccaagactcgcacgcccgcc
gtttctaccatgggcatcatgaaaaccttggatatcatcgactcgcacaccggcggtgaa
ccgacccgcctcgtggtgtcgggcggcccggatctcggcggcggcacgctggcgcaacgg
ctcgacgtgttccgcacgcagttcgacgactggcgcgcgggcatcgtcactgaaccgcgc
ggctcggacgtggtggtgggcgcgctgctctgcgagccggacgacccgacgtgcgcggcc
ggcgtgatctttttcaacaacgtcggctatctcggcatgtgcgggcacggcacgatcggg
ctcgtcgtctcgctggcgcacctgggacggatcggggcgggacggcatcggatcgagacg
ccggtcggcattgtcgaggcgacgctgaacgacgacggcagcgttgccgtgcgcaacgtg
cccgcgtaccggtatcgccggtcggtgcaagtggacgtgccgggtcacggcgtgctaacc
ggcgacatcggctggggcggcaactggttctttctcgtcgcggatcacgggcgcgtgctg
gaagcgtcgcggatcggcgaattgaccacgttcagcggcgcgattcgcgatgcgctgatc
gcgcaacacatcaccggcgcggacggtgcgttgatcgaccacatcgaactcttcggaccg
ggttcgcgcgatggcctcgacagccgcagcttcgtgctctgtcccggcagtgcgtacgat
cgctcgccgtgcggcaccggcacgagcgccaaggtggcgtgccttgctgccgacggcaaa
ctggccgaaggcgcggtctggcgacaggaaagcattatcggcagcgtgttcgaggcgagc
tatcgccacgccggcgatggcgtccacgtgattcccaccatcaccggtcacgcgtacatc
acggcagaagcgcgcctttgcttcgacgagcgcgatccgttcgcgtggggcatccccgcg
gcatga
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