Paraburkholderia phytofirmans PsJN: Bphyt_5050
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Entry
Bphyt_5050 CDS
T00765
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00260
Glycine, serine and threonine metabolism
bpy01100
Metabolic pathways
Module
bpy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphyt_5050
Enzymes [BR:
bpy01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Bphyt_5050
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Bphyt_5050
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
FAD_binding_2
NAD_binding_7
Pyr_redox
HI0933_like
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ACD19414
UniProt:
B2TCJ0
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All DBs
Position
2:1206681..1209683
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRAMPLTFTFNGRQYQGYQGDTLASALLANGEHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAVNQKFARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEHTDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALHWVQKIEDELRQMPEVKILC
RSTAFGYQDHNLVTLTQRLTEHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVVDPRASESKG
TLPALARRYGVKVLNGVVITAAHGKLRVASVDLAPYSNGQVGAKQSELACDLLAMSGGWS
PVLHLFAQSGGKAHWHDEKACFVPGKAMQPETSVGACAGDFKLGQGIRFAMDAGAEAARA
AGHIVARPNPVQVAEITEAKMLPLWLVGGREMATRGPKQFIDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPKAGEDLHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
QDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGETAAMLGHVTSSYYSPILKRSIAMAVVK
GGLDKIGETVTIPLSSGKQIAAKVTSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactccccaacggcggccgcatcaatcgcgcaatgccgctgacc
ttcaccttcaacggccgccagtaccagggctatcagggcgacacgctggcttcggcgctg
ctcgcgaacggcgagcatttcgtcgcgcgcagctggaaatatcaccggccgcgcggcatc
gtgacagcgggtgtggaagagccgaatgccgtcgtgcaactcgaaaccggtgcgtacacg
gtgccgaatgcgcgcgcgaccgaagtcgagttgtatcaggggctcgtcgccaccagcgtg
aacgcgaagccgagcatcgagaaagaccgcatggcggtcaaccagaagttcgcccgcttc
attccggcgggcttctactacaagaccttcatgtggccgcgcaaattctggccgaagtat
gaagaagtgatccgcgacgcggccggcctcggcaaggcgccggaacatactgacgcggac
cgttatgacaagtgctttgcgcattgcgacgtgctggtggtgggcggtggcccgaccggc
ctcgcggcggcgcatgccgccgcgttgtccggcgcgcgcgtgacgctggtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagcccgcgctc
cactgggtgcagaagatcgaggacgaactgcggcagatgcccgaagtgaagatcctgtgc
cgcagcacggcattcggctatcaggaccacaatctcgtgacgttaacgcagcggctcacc
gaacatctgccggtgtcgcaacgcaagggcacgcgcgaactgatgtggaagatccgcgcg
aaacgcgtgattctcgcgaccggcgcgcacgagcgtcccatcgtgttcggcaataacgat
ctgccgggcgtgatgctggcgtcggccgtgtcgacctatctgcatcgctatgcggtgctg
ccgggccgcaacgcggtggtgttcaccaataacgacgacggttatcaatgcgcgctcgat
ctgaaagcagccggcgctcaggtgacggtggtcgatccgcgcgcgagcgaatcgaaaggc
acgctgcccgctctggcacgccgctacggcgtcaaggtgttgaacggtgtcgtgatcacg
gcggcgcacggcaaactgcgcgtggcgtccgtggatctcgcgccgtattcgaacggacag
gtcggtgcgaagcagagcgagcttgcctgcgatctgctcgcgatgtccggcggttggagc
ccggtgttgcatctgttcgcgcaatcgggcggcaaggcgcactggcatgacgagaaggcg
tgcttcgtgccgggcaaggcgatgcagccggaaaccagcgtcggcgcatgcgcgggcgac
ttcaagctcggccagggcatccgtttcgcgatggacgcgggcgccgaagccgcgcgcgcg
gccggtcatatcgtggctcggcccaatccggttcaggtcgccgagatcacggaagcgaag
atgctgccgctgtggctggtcggcggccgcgagatggctacgcgcgggccgaagcagttc
atcgatttccagaacgacgtgtcggccgcggatattttcctcgcggcacgcgagggcttc
gaatcggtcgagcacgtaaagcgctatacggcaatgggtttcggcaccgaccagggcaag
ctcggcaacatcaatggcatggcgattctcgcgcaggcgctcggcaagacgattccggag
accggcaccacgaccttccgtccgaactacacgcccgtcaccttcggcacgttcgccggc
cgcgagctgggcgagtttctcgatccggtgcgcaagacggcggtacacgagtggcatgtg
gaaaacggcgcggctttcgaggacgtcggcaactggaagcgtccgtggtactacccgaaa
gcgggcgaagacttgcacgcggcggtggcgcgcgaatcgctcgcggtgcgcacgagcgtc
ggcattctcgatgcttccacgctcggcaagatcgacattcagggccccgattcggcgaag
ctcctgaactgggtctacacgaatccgtggagcaagctggaagtcggcaagtgccgctac
ggtctcatgctcgacgaaaacggcatgatcttcgacgacggcgtgaccgtgcgcctcgcc
gatcagcactacatgatgacgaccaccaccggcggcgcggcgcgcgtgctgacgtggctc
gaacgctggctgcaaaccgaatggccagatatgcgcgtgcggctcgcgtcggtgacggat
cattgggcgacttttgccgtggtcggtccgaacagccgcaaggtgctgcagaaggtctgc
caggacatcgacttcgcgaacgcggcgttcccgttcatgagctatcgcgaaggcacggtg
gcgggcgcggcctcacgggtgatgcgcatcagcttctcgggcgaactggcttatgaagtg
aacgtgccggcgaacgttggacgcgcggtgtgggaagcgctgatggccgcgggtgccgag
ttcgacatcacgccgtacggcaccgaaaccatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggatacggacggctcgatgacgccgtacgacctcggcatgggcggg
ctcgtcgcgaagtcgaaggactttctcggcaagcgttcgctgacgcgctcggacaccgcg
aaggccgggcgtaagcaactggtcggcctgctctcggacgatccgtcgttcgtgataccg
gaaggctcgcagatcgtcgcgggtccgttccagggcgagacggcggcgatgctcggccac
gtcacgtcgagctactacagcccgatcctgaagcgttcgatcgcgatggcggtcgtcaag
ggcggcctcgacaagatcggcgaaacggtcacgattccgctttcgagcggcaaacagatt
gcagcgaaggtcaccagttcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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