Paraburkholderia phytofirmans PsJN: Bphyt_5063
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Entry
Bphyt_5063 CDS
T00765
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00260
Glycine, serine and threonine metabolism
bpy00460
Cyanoamino acid metabolism
bpy00630
Glyoxylate and dicarboxylate metabolism
bpy00670
One carbon pool by folate
bpy00680
Methane metabolism
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
bpy01120
Microbial metabolism in diverse environments
bpy01200
Carbon metabolism
bpy01230
Biosynthesis of amino acids
bpy01240
Biosynthesis of cofactors
bpy04981
Folate transport and metabolism
Module
bpy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphyt_5063
09102 Energy metabolism
00680 Methane metabolism
Bphyt_5063
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphyt_5063
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphyt_5063
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphyt_5063
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bphyt_5063
Enzymes [BR:
bpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphyt_5063
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACD19427
UniProt:
B2TCK3
LinkDB
All DBs
Position
2:1221876..1223150
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AA seq
424 aa
AA seq
DB search
MSNPNPFFEATLATRDTAVRGAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEYADVVETLALDRIKQLFNAKFANVQPHSGAQANGAVMLALVKPGDTV
LGMSLDAGGHLTHGAKPAMSGKWFNAVQYGVNRDTMLIDYEQIEVLAQQHQPALLIAGFS
AYPRALDFARLRAIVDSVGAKLMVDMAHIAGIIAAGRHQNPVEYAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPGFKTYIDSVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVSEFREIGRLIVEVLDALRDHPEGHAATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgaatcctttcttcgaagcaacgctcgccacgcgcgatacggcggtgcgc
ggcgctattctgaaagagctcgagcgccagcagtcgcaagtcgaactgatcgcgtcggaa
aacatcgtgtcgcgcgcggtcctcgaagcgcagggctcggtgctgaccaacaagtatgcg
gaaggctatccgggaaagcgttactacggcggttgcgaatacgccgacgtggtcgaaacg
ctggcgctcgatcgcatcaagcaactcttcaacgcaaaattcgccaacgtgcagccgcat
tccggcgcgcaggcgaacggcgcagtgatgctcgcgctggtgaagccgggcgacacggtg
ctcggcatgtcgctcgacgcgggcggccacctcacgcacggcgccaagccggccatgtcc
ggcaagtggttcaacgcggtgcagtacggtgtgaatcgcgacacgatgctgatcgattac
gaacagatcgaggtactcgcgcagcagcatcaacccgcgctgctgatcgcgggcttctcg
gcttatccgcgagcgctggattttgcacggttgcgcgcgatcgtcgacagcgtcggcgca
aagttgatggtggatatggcgcacatcgccgggattatcgcggcgggtcgccatcagaac
ccggtggaatacgcacacgtggtgacgtcgaccacgcacaagacactgcgcggcccgcgc
ggcggctttgtgttgacgaatgacgaagacatcgcgaagaagatcaactccgccgtattt
cccggcttgcagggcggcccgctgatgcatgtgatcgccggcaaggcggtcgcgttcggc
gaggcgctggaaccgggcttcaagacgtatatcgacagcgtgctcgccaatgcccaggcg
ctcggcgaagtgctcaaggcaggcggcgtcgatctggtcacgggcggcacggacaaccat
ctgctgctggtcgatctgcggccgaagggcctcaaaggcaatcaggtcgagcaggccctg
gaacgcgcgggcatcacctgcaacaagaacggtattcccttcgataccgaaaagccgacg
gtcacgtccggcattcgcctgggcacgcccgcgggcaccacgcgcggcttcggcgtcagc
gagttccgcgaaatcggccggctgatcgtcgaggtgctcgacgcgctgcgcgatcacccc
gaaggccatgccgccaccgaacaacgcgtgcgccgcgagattttcgcgctgtgcgagcgc
tttcccatctactga
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