Paraburkholderia phytofirmans PsJN: Bphyt_5098
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Entry
Bphyt_5098 CDS
T00765
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00061
Fatty acid biosynthesis
bpy00071
Fatty acid degradation
bpy01100
Metabolic pathways
bpy01212
Fatty acid metabolism
bpy02024
Quorum sensing
bpy04146
Peroxisome
Module
bpy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bphyt_5098
00071 Fatty acid degradation
Bphyt_5098
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bphyt_5098
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphyt_5098
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpy01004
]
Bphyt_5098
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpy04147
]
Bphyt_5098
Enzymes [BR:
bpy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bphyt_5098
Lipid biosynthesis proteins [BR:
bpy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bphyt_5098
Exosome [BR:
bpy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bphyt_5098
Exosomal proteins of breast cancer cells
Bphyt_5098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACD19461
UniProt:
B2TCN7
LinkDB
All DBs
Position
2:1262532..1264232
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AA seq
566 aa
AA seq
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MSGTNSDTLVHRFVHWERVQPDTPYLTESMPDGQVVEYTWQEVGDQARRMAGYLQSLQLP
PRSAISIVGKNSAHWIIADLAIWMAGHFSVPLYTTINADTAQYIFEHCDVRLLFVGKLDG
KTDGWNEIRKAVPPHARLIGLPMSPVPEALQWDDIVASQAPLRDVHLPAPGELATIIYTS
GTTGRPKGVLHSFGTIFAYAAQAGEFCGFTPADRVLSYLPLAHTAERSFVESNSLCHGFQ
VFFNDSLATFVQDLHRARPTVFISMPRLWTKFYQGVCAKLPASQQALLETASPEAAVIKQ
QILTMLGLDATRIAFTGSAPLPEEITNWYRMLGLELLDVYGMTENFSYSHYSRPGLVRPG
YCGQAMPGVECRIAGNGEILLKAPTMMLGYYRQPDLTAQSMTEDGFFKTGDCGELDELGR
LKITGRVKENFKTSKGKYVAPAPIENKLSHAKVEAVCATGPGLAQPFALLMLSAAARGEL
QGTPAYDALRAELRGMLDKVNDTLEDHEKLAFAVVVADAWTSDNGLLTPTMKIRRGAIEK
RYLPMAQAWAELGQPVIFETQSVKTQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacgaattcggacacactggttcatcgctttgtgcactgggagcgtgtgcag
cctgatacaccgtacctcaccgagtcgatgccggacggacaggtcgtggagtacacctgg
caggaggtcggcgatcaggcccggcgcatggctggctatttgcagtcgttgcaactgccg
ccgcgcagtgcgatctcgatcgtcggcaaaaatagcgcccactggatcatcgcggatctg
gcgatctggatggccggtcacttctcggtaccgctctacacaaccatcaacgcggacact
gcgcagtacatcttcgagcactgcgacgttcgtttgctgttcgtcggcaagcttgacggc
aagactgacggctggaatgaaattcgcaaagcagtgccgccgcatgcgcggttgatcggc
ttgcccatgtcacccgtgccggaggccctccaatgggacgatatcgtcgcgagccaggcg
ccattacgggacgttcacctgccggctccaggcgaactggctacgatcatctatacatcg
ggcaccaccggccgtcccaagggcgtcctgcacagcttcgggacgatctttgcctatgcg
gcgcaggcaggtgaattctgcggcttcactccggcggaccgcgttctgtcctatctgccg
ctcgcacacacggccgagcgctccttcgtcgaatcgaattcgctttgccacggtttccag
gttttcttcaacgatagtcttgctactttcgttcaggacttgcatcgcgcgcgaccgact
gtattcatttcgatgccgcgactgtggaccaagttctatcagggcgtctgcgcgaaactt
cccgcgagccagcaagccttgcttgagacggcgagccccgaagccgcggtcattaaacag
cagatcctcacgatgctcgggctcgacgcgacaagaatcgcctttaccggctcggcgccg
ctgcctgaggaaatcacgaactggtatcgcatgctcggcctcgagttactggacgtgtac
ggcatgacggagaacttctcgtactcgcattacagccgcccagggctcgtgcggcccggc
tattgcggccaggccatgccgggcgtcgaatgccggattgccgggaatggcgagattctg
ctcaaagcgccgaccatgatgctcggctactacaggcagccggacttgaccgcgcaaagc
atgaccgaggacggcttcttcaaaaccggcgattgcggcgaactcgacgaactcggccgt
ttgaaaatcacagggcgggtgaaagaaaacttcaagaccagcaagggaaaatatgtggct
cccgcgcccatcgagaacaagctgagtcatgcaaaagttgaagccgtgtgcgcgacgggg
ccggggctcgcccagccgttcgcgctgttgatgctgtcggccgccgcgcgcggagaactc
cagggcacgcctgcgtatgatgccttgcgtgccgagctgcgcggcatgctcgacaaggtc
aacgacacgcttgaagatcacgagaagctcgccttcgccgtggtcgtcgcggatgcctgg
acgtccgacaatggcttgctcacgccaaccatgaagatcaggcgcggcgcaatcgagaaa
cgttatctgccgatggcccaggcgtgggctgaactcggacaacccgtcatattcgaaacg
cagtccgtcaagacgcaatga
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