Paraburkholderia phytofirmans PsJN: Bphyt_5986
Help
Entry
Bphyt_5986 CDS
T00765
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphyt_5986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_5986
Enzymes [BR:
bpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Bphyt_5986
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Bphyt_5986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACD20319
UniProt:
B2T851
LinkDB
All DBs
Position
2:complement(2212687..2213499)
Genome browser
AA seq
270 aa
AA seq
DB search
MARLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAVDSAFPVEQLRDAGYGAIWQ
GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYIEAAVGGVLVACLYLPNGNPQPGPK
FDYKLAWFDHFIEHAAKLYKSAHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERY
QRLLAQGWTDALRTHFGDERVYTFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDAGVDR
WVRGEPHASDHAPTWVELEMGATRRKKSGA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtggccaggcttcgaatcgcgaccttcaacatcaacggaatccgctcgcgcctgccggcg
ctgctgcaatggctcgaacgcgaagcgcccgacatcgtctgtttgcaggaactcaaggcg
gtggacagcgcgtttccggtcgagcaactgcgcgacgcgggctatggcgcgatctggcaa
gggcagagtgcatggaacggcgtggcgatcctgtcgaagggcgaagcaccgctggagagc
cgccgtggcctgcccggtttcgaggacgacacgcacagccgctacatcgaagcagcggtc
ggcggcgtgctggtggcgtgcctttatctgcctaacggcaatccgcaaccgggccccaag
ttcgactacaaactggcgtggttcgaccatttcatcgagcacgcggcgaagctatacaag
agcgctcatccggtcgtgctggccggcgacttcaacgtggtgccgaccgacgaagacatc
tacaacccgcgctcgtggctaaaggatgcgctgttgcaaccggagagccgcgagcgctac
cagcggctgctcgcgcaaggctggaccgacgcgctgcgaacgcatttcggcgacgaacgc
gtctacaccttctgggactatttccgccggcattgggagacgaactcaggcttgcgcatc
gaccatctgctgctgagcgccgacctcgcgccgcgcttgcgcgatgcgggcgtcgaccgc
tgggtgcggggcgagccgcatgcgagcgatcatgcgccgacgtgggtcgagttggagatg
ggcgcgacgcgccgcaagaaaagcggcgcatga
DBGET
integrated database retrieval system
