Paraburkholderia phytofirmans PsJN: Bphyt_6475
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Entry
Bphyt_6475 CDS
T00765
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03420
Nucleotide excision repair
bpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bphyt_6475
03430 Mismatch repair
Bphyt_6475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_6475
Enzymes [BR:
bpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bphyt_6475
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bphyt_6475
MMR (mismatch excision repair)
Other MMR factors
Bphyt_6475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
Viral_helicase1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ACD20781
UniProt:
B2T8W8
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All DBs
Position
2:complement(2761364..2763250)
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AA seq
628 aa
AA seq
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MTSRIGSPDTPADIEVRECLDEQPARSFVMVAGAGSGKTTSLVKALQHLAVSRGAMLRRA
GQQIACITYTEVAVAEISGDVGNASTFHVSTIHSFLWLLVRSFQADIKLWVVDRIREKIA
EKAEHRDRRGTRAGTRERLIREIAELEEVRTTVARVERFTYGTGSDYAEGVLGHDDILKL
GPALIVERPLLRQIIAGRFPFIFVDESQDTNPVVVSALRCVAADQPQLCVGFFGDPMQKI
YTTGAGPIAREREWREITKPENFRCPTSVLRVVNAIRATGDGLEQTRGRALEVDGVLQPV
TGSAQMFVLPADGNRTAGLQAVRLWLRNSTADPLWSSDNAEADVRLLVLVHRMAASRLGF
ANIYAALHDGAPASLKDGLDDGSAWPLRPLLQFVLPLVIAVRSGDQFKVMSLLRSACPQL
ETDRIQQQEIQGVLRQLQEGVDALAGLLEDGAHASILDVLRLIRDREMLRLDERFNTYLM
PDPLDNGSSEFQHIVGFLACHAIELWGYRKYIEEESPFATQQGVKGAQFERVLVVLDDEE
GPHSHFSYGKYFGFVPLSENDEEKIASGAESVLDRTRRLFYVCCSRAVKDLAVVMFVPDV
ELARNAVERTAIFPPGRVFGLEDLEGLA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcgcatcgggtctcccgacacgccggcagacatcgaggtccgcgaatgtctc
gatgaacagcctgctcgatccttcgtcatggtggccggtgccgggtcgggcaagacgacc
tcgctagtcaaggcgctgcaacacctcgctgtgtcgcgtggtgcgatgcttcgtcgggca
ggtcagcagatagcctgcatcacatacacggaagtcgccgtggctgaaatttcaggagac
gttgggaatgcttcgacgtttcacgtctcgaccatccacagcttcctgtggctactcgta
cgcagttttcaggcggatatcaagctctgggtcgtcgatcgcattcgggagaaaatcgcg
gagaaggcggaacaccgcgacagacgggggacgcgagcgggaacgcgagagcgactgatt
cgtgagattgccgaactcgaggaggtaaggacaaccgttgcgcgcgtggagcgattcact
tatggcacggggagcgactatgccgaaggcgtgctgggacatgatgacattttaaagctc
gggccggccctcatcgtcgaacgtcccctactgcgccagatcatcgccggccgtttccca
ttcattttcgtggacgaaagccaggataccaatccagtcgtagtaagtgcactgcgttgc
gtcgcggccgaccagccgcagttgtgtgtgggtttttttggtgatcccatgcagaagatt
tacaccactggagctggaccaatcgcgcgggagcgtgagtggcgtgaaatcacaaaaccg
gagaatttccggtgtccgacatcggtgctccgcgtcgtgaacgcaatccgggcgacgggc
gacggtcttgaacagacgagaggccgggcgctcgaggtcgatggtgtgctgcaaccagtg
accggatccgcgcagatgtttgtgctaccagcggacggaaatcgcacagcgggtctgcag
gccgtgcggttgtggctgagaaactcgaccgccgacccgttgtggtcgagcgataacgct
gaggcagacgttcgcctgttggtcctggttcatcgaatggcagcctcgcgcctagggttc
gcgaacatctacgcggcgctccacgatggagcacctgccagcttgaaggatggcctggat
gacggcagcgcttggccgctgcgtccattgctgcagtttgtgttgccactggtcatcgcc
gtacggtcgggtgaccagttcaaggtcatgagccttttgcggtcggcgtgtcctcagctc
gaaacggatcgaatccagcagcaagagattcaaggcgtacttcgtcaactccaggaggga
gtcgacgcacttgctggtctccttgaggacggggcgcacgcgtcgatactggatgtgttg
aggctcattcgcgaccgagagatgttgcggcttgatgagcgattcaatacctacctgatg
ccagacccgctggataacggcagcagcgaattccaacatattgtcggttttcttgcctgt
cacgctattgagttgtgggggtaccggaagtacatcgaagaagagtcgccctttgccacg
caacagggtgtcaagggggctcaatttgagcgggtactggtcgtcctggatgatgaggaa
ggaccacacagccacttttcctacgggaaatacttcggctttgttccgctatcggaaaac
gacgaggagaaaattgcatccggcgctgaatccgtactagaccgcactcgtcggctcttc
tacgtttgctgttcgcgtgcagtcaaggacctggcggtggtgatgttcgtaccggatgtc
gagttagcccgcaatgccgttgagagaacggctattttcccaccagggagggttttcggg
ctcgaggatctggaggggttggcgtga
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