Paraburkholderia phytofirmans PsJN: Bphyt_6556
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Entry
Bphyt_6556 CDS
T00765
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00450
Selenocompound metabolism
bpy00970
Aminoacyl-tRNA biosynthesis
bpy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Bphyt_6556
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Bphyt_6556
Enzymes [BR:
bpy01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
Bphyt_6556
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GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACD20855
UniProt:
B2TBB3
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All DBs
Position
2:complement(2846390..2847820)
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AA seq
476 aa
AA seq
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MSDVSGSELRALMARVPSVEKVMASAEFAALLAEYGRTQVLGAVREALDTWRAGAQSGDA
SVSALDVAQLKSAVEAALRKRHESRLRSVFNLTGTVLHTNLGRALLPDEAVQAVMKALTQ
PANLEFDLGTGKRGDRDDLIDELICELTGAEAATVVNNNAAAVLLTLSALASKKEVIVSR
GELVEIGGAFRIPDIMSRAGAKLREVGTTNRTHLKDYEEAIGPQTALLMKVHASNYAISG
FTKEVGLNEIAPLAHARGLAVAVDLGSGTLVDLSQWGLPRETTVRETVEAGADLVTFSGD
KLLGGPQAGLIVGRRDLIAKIKKHPLKRALRVGKLTLAALEPVLQLYRAPERLTERLTTL
RLLTRAADDIRLAADRVQPALQHAVGERYAVTAEPMFSQIGSGALPVDVLPSYGLVVRMA
DGKRGGRQLLALEKMLREMARPVIGRIADDALRLDLRCLEAADEAQLVEQLKGARA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgtaagcggctctgaattacgggcgttgatggcgcgcgtgccgtcggtggaa
aaggtgatggcgtcggccgagttcgcggcgctgctcgcagaatatggccgcacgcaggtg
ttgggcgcggtgcgcgaagcgctcgacacatggcgcgccggcgcgcaatcgggcgatgcg
tccgtgagcgcgctcgacgtcgcgcaacttaagagcgcggtcgaagccgcgctacgcaag
cgccacgagtcgcgcttgcgcagcgttttcaatctgaccggcacggtgctgcataccaat
ctcggtcgcgcattgctgcccgacgaggcggttcaggccgtcatgaaagcgctcacgcaa
cccgccaacctcgagttcgatctcggcaccggtaagcgcggcgaccgcgacgatctgatc
gacgagctcatctgcgaattgaccggcgccgaagcggccaccgtggtcaacaacaacgcg
gccgcggtgttgctcacgctgtccgcgttggcgtcgaagaaagaagtcatcgtgtcgcgc
ggcgagctggttgaaatcggcggtgcgttccgcattcccgacatcatgagccgcgcgggc
gcgaaattgcgtgaagtcggcacgacgaaccgcacgcatctgaaggactacgaggaagcc
atcggcccgcaaaccgcgctgctgatgaaagtccacgcgagcaactatgcgatcagcggc
ttcaccaaagaggtcggtctgaatgaaatcgcgccgctcgcccacgcgcgcggcctcgcg
gttgccgtggatctcggcagcggcacgctggtcgatctgagccaatggggcttgccgcgc
gagacgacggtacgcgaaaccgtcgaggccggtgcggacctcgtcacgttcagcggcgac
aagttgctcggcggtccgcaagccggtttgatcgttgggcgacgcgatctgatcgcgaag
atcaagaagcatccactcaagcgcgcgttgcgcgtcggcaaactgacgctcgcggcgctg
gagcctgtgctgcagctttatcgcgcgccggagaggctcacggagcggctcactacgctg
cgcttattgacccgtgccgccgatgacatccggctcgctgcggatcgcgtgcagcccgcg
ttgcagcacgcagtcggcgaacgttatgcggtgacggcggagccgatgttcagtcagatc
ggcagcggcgcgttgccggtcgacgtgctgccgagttatggtctggtcgtcagaatggcg
gacggcaaacgcggcggccgtcaattgcttgcgctcgaaaagatgttgcgggaaatggcg
cggcccgtgatcggtcgcatcgcggacgatgcgttgcgtctcgatctgcgctgcctagaa
gccgccgacgaagcgcaactggtcgagcaactgaaaggcgcgcgcgcatga
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