Bombus pyrosoma: 122565616
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Entry
122565616 CDS
T07776
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpyo03016
]
122565616
Enzymes [BR:
bpyo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
122565616
Transfer RNA biogenesis [BR:
bpyo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
122565616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
122565616
NCBI-ProteinID:
XP_043577678
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All DBs
Position
LG3:complement(6442463..6444657)
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AA seq
451 aa
AA seq
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MNLREPKKKRRVKLTEQLPLPIVIGNQDEWTTYTAHLTDLGSCIIDPNEIVAVHSMGFFG
KGSLSRGFPSFGKTQYGAPPVIRNRQWLRRQEWLKQFNKLSMEPNSTQTNPEGNKCEIVI
MNSYSTSPNDDDVELLSMKISPTKQNTLDIIEIDTNSAHVDEKYKKNQQTDEELEVDGTI
SNSTKEDDALIIIENKSSKQCNNIDNNKKGSIENEEKSPSGFSLKENDICFTKNNLDVQN
KLLVLPDSDSETENYLQKIKPKIECEIFPIQETLHLTFEETFFLLYGLGCLNLIDFDGNL
LDIDSAWHIFCKTDKNFISKYVVYHYFRSKGWVVKPGLKYGGDFLLYKQGPPFYHASYIV
IIDTLDSDTLVTDQNKCMHKLTWNSLLGLERLSETAAKEILFAQVLWPSSTLQTSDSLNV
DMLPEFSVRELLWRRWNPKHKDIEEEDDDSY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacgagaaccaaagaaaaaacgacgtgtgaaattaacagaacaattaccactt
cctattgtaataggtaatcaggatgaatggactacatatactgctcatctcaccgattta
ggatcttgtataattgatccaaatgaaattgttgcagtacattctatgggcttttttgga
aaaggttctttgtcacggggttttccttcatttggcaaaacacaatatggagctcctcca
gttataagaaacagacaatggcttcgcagacaggaatggttaaaacaatttaataaactt
agcatggaacctaatagcacacaaacaaatccagaaggaaacaagtgtgaaattgttatt
atgaacagttattctacaagtcccaatgatgatgatgtcgaattattgtcaatgaaaatc
agtccaacaaaacaaaatactctagatataattgaaatagatacaaactctgctcatgta
gatgaaaaatacaaaaaaaatcaacaaactgatgaagagttagaagtagatggtacaatt
tcaaattccacaaaagaggatgatgcattgattattatagaaaacaaatctagcaaacag
tgtaacaatattgataataataaaaaaggatccattgaaaatgaagagaagtctccttca
ggttttagtttaaaagaaaatgatatatgttttactaaaaataatttagatgttcaaaac
aaattacttgtcttaccagatagtgactcagaaactgaaaattatttacaaaaaattaaa
cctaaaattgaatgtgaaatttttcctattcaagaaactcttcatcttacatttgaagaa
acattttttcttttgtatggtttaggttgtttaaatttaatagactttgatggtaattta
ttagatattgatagtgcttggcatattttctgcaaaactgataaaaattttatatcaaaa
tatgttgtatatcattactttcggagcaaaggatgggtagtaaaacctggacttaaatat
ggtggagattttttattatataaacaaggaccaccattttatcatgcatcttacattgta
ataatagacactttggatagtgataccttagtcacagatcaaaataaatgtatgcataaa
ttaacatggaatagtttattaggactggaaagattatcagaaactgcagcaaaggaaata
ttatttgcacaagttttgtggccatcatcaactttgcaaacatctgattcattaaatgtg
gatatgcttcctgaattttctgtgagagaattattatggcgaagatggaatcctaaacat
aaagatatagaagaggaagatgatgattcatattga
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