Bombus pyrosoma: 122565632
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Entry
122565632 CDS
T07776
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122565632
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122565632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
DUF4158
RuvA_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
122565632
NCBI-ProteinID:
XP_043577740
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All DBs
Position
LG3:7046572..7056314
Genome browser
AA seq
675 aa
AA seq
DB search
MICIHNSICTDSRRSLDAKGYDRLQFVEGDMTVAGKKYVDCTVLETESIADAEDSSYDSD
YEAEDSVGSTNIHSQVELQVSTSSHSDVSRTASDTLAAEFAEYVTVQGSPPVQSPGYTAR
VEFALKLGYTERLVQTALEKLGPDPEQNELLAELIKLGASCSQKSVDTPEEPDNVADTDL
MSNENSGCSSSLRSVVIDGSNVAMSHGNKEIFSCRGIKICVDWFKARGHKEITVFVPKWR
KETSRIDNPIADQEILGELERDRLLVFTPSRLVGGKRMVCYDDRYILKLAAEIDGIVVSN
DNYRDLAQENPEFRKVVEERILMYTFVNDRFMPPDDPLGRSGPTLDNFLRTFPKKSDPAP
PCPYAKKCTYGNKCKFRHPERGLHPQKSVTEKLVEHVQKQLQVRGSSPNVFLSSNISTNA
FQHQPLCKTKSTVTTSIQPLPSVTKSRSAENVTLDQPMNSTIHGLQVPPTTSSQGYRSSC
RSTGRLNKPEAEPPNIHKKLQRQLTLNPVYDPRLHQLRQYQQASQTSSLLQQTAITSSTA
RHRALSRHSSNESAYRAGMNWDRSEGGQCHQHVTRIASAPDSYKAWLSNNSNLAVPSGSS
QRLGASDSQLNVPTSPLYSAMPTDMLRDFLDTRTKIHYHLANIFPEEHVRTAMLIHPFET
DPIEICVAILKMYPQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtatacataatagtatttgtacggattcgagaaggtctttggacgcgaaagga
tacgatcgattacaattcgtggaaggagatatgaccgtcgccggaaagaaatacgtagat
tgtaccgtcctggaaactgaaagtattgctgacgcagaagattcttcttacgatagcgac
tacgaagctgaagattcagtgggatctacgaatattcattcacaagtggaattgcaggta
tctacgtcaagtcattcagatgtgtcccggaccgcctcagatacgttggctgctgaattt
gcagaatatgtcacagtgcaagggagtccaccggttcagagtccagggtacactgcccga
gtagaattcgcccttaagcttggctacacggaacgtttagttcaaacagcgttggaaaaa
ttgggcccagatccggaacaaaacgaacttttggctgagttgataaaactcggtgccagc
tgttctcaaaaatcagttgatacaccagaggagcctgataacgtcgcggacactgattta
atgtccaatgaaaacagcggatgctccagtagtctcagatctgttgtaattgatggaagc
aatgtggcgatgagtcatggaaacaaggaaatattttcttgtagaggaattaaaatatgc
gtggattggtttaaagctcgagggcacaaagaaattaccgtatttgtgccgaagtggaga
aaggaaacttccaggattgacaatccgatcgccgaccaagaaattttgggagaattggaa
agggaccgtttgttggtttttactccatccagattagttggtgggaaaagaatggtttgt
tacgatgatcgctatattttgaaactagcagcagaaatcgatggtattgttgtcagcaat
gataattacagagatttggcacaggaaaatccggaatttcgaaaagttgtggaagaaaga
attttgatgtatactttcgtaaatgatcgctttatgccaccagacgatccactaggtaga
agcggtcccactttagacaactttttgagaacttttcccaaaaaatctgatccagcacca
ccttgtccatacgcgaagaaatgcacttatggaaataagtgtaaatttcgacatccagaa
agaggtcttcatccacaaaaatcagttacagagaagttagtagaacatgtacaaaagcag
cttcaagtaagaggttcaagtccaaatgtatttttatccagcaatatatcgaccaatgcg
tttcaacatcaaccgctttgtaaaaccaaatcaacggtaactaccagtatccaaccatta
ccttcagttacaaaaagcagatctgcagaaaatgtcacgcttgatcaaccaatgaattcc
acgatacatggtttacaagtgccacctaccacaagttctcaaggttatcgttcttcctgt
cgatcgacaggaagattgaataaaccagaagcagagccgccaaatatacataagaaacta
cagaggcagttaactttaaatccagtgtacgatcctcgacttcaccagctgagacaatat
cagcaagcatctcaaacaagttcattattacaacaaactgcaataacatcttctacagca
cggcacagagccttaagtaggcattctagtaacgaatcggcctacagagctggcatgaat
tgggatcgttctgaaggagggcagtgtcatcaacacgtaacacgtattgcttcggcgcct
gattcttacaaggcttggttatcaaataattcaaacttagctgtaccatcaggatcgagt
caacggctgggtgcttcagattcacagttaaatgtccctacatctcccttgtattcagct
atgccgacggatatgttaagggattttctcgataccagaacaaaaatacattaccatttg
gcaaatatctttcctgaagaacatgtgagaactgctatgctaattcatccatttgaaaca
gatccaatagaaatctgtgttgctattttgaaaatgtatccccaataa
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