Bombus pyrosoma: 122565677
Help
Entry
122565677 CDS
T07776
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122565677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122565677
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122565677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2110_N
RRG8
Motif
Other DBs
NCBI-GeneID:
122565677
NCBI-ProteinID:
XP_043577823
LinkDB
All DBs
Position
LG3:8169676..8172255
Genome browser
AA seq
410 aa
AA seq
DB search
MKEVLLTNCEKNFVNKSVEQGTRLDGRCLFEARPAKIYFASNWGSCMVLLGQTRVVAQVT
CDIQQPKTSRPNEGMLHINVELNPMAAQHFDGGRQSEISVLISRQLEKCYQDSKCIDLES
LCIIADKQVWNLRVDVNVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDIIVHPFSEK
DPLPLTLYHYPVCVSFITFESGSTVMDPTYLEERVGVAQLTLGINSYRELCSLHFNYLTK
TMTVEDVISAVSTYASNYAVQLVQQIKEAVNYDVETRYKKDNRNVNRFKECIMTKKLTTM
NSECISIKLRKWGEIEKIVSNVDVEKEDEDENCTIIKPGEGSAELIANTGMSFGEGGPNT
WNSSESSEEEINDVEITAEIKKEENKIEDIELSGDSEDEAIEMLETKDLM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagttttgctaacgaattgtgaaaagaactttgtaaataaatcagtggaacaa
ggcacgcgattggatggtagatgtttatttgaagcacgacccgctaaaatttattttgca
tccaattggggtagttgtatggttttgcttggtcaaactagagttgtagcacaagtaaca
tgtgatattcaacaacctaagacttctcgtcctaatgaagggatgttacatataaatgtt
gaacttaatccaatggctgcgcagcattttgatggtggtagacaatctgagatttcagta
ttgattagcagacaacttgaaaaatgttatcaagattccaaatgtatagatttagaatct
ttatgtatcatagctgataaacaagtgtggaatttaagggttgatgttaacgttattaat
catgatggaaatttaatcgattgtgcttccattgcaacattagctgctctctcacatttc
cataggcctgatgtaacttcaaatggtgaagatattatagttcatccattttctgaaaaa
gaccctttacctttaacattatatcattatccagtgtgtgtctcttttataacatttgaa
agtggaagtacagttatggatccaacatatttagaagaaagagttggtgtagctcaactt
actcttggtattaattcgtatagagaactttgtagtttgcattttaactacttgacaaaa
actatgactgttgaagacgtgatatcagcagtttctacttatgcatcaaattatgctgtt
caattagtgcaacaaataaaagaagcagtaaattatgatgtagaaacaaggtacaagaaa
gataatcgtaatgtaaatcgttttaaagagtgcataatgacgaagaagttgacaactatg
aatagtgaatgtatcagtattaaactgcgtaaatggggtgagatagaaaaaatagtatct
aatgttgacgtagagaaagaggacgaagatgaaaattgtacaattataaagcctggagaa
ggttctgctgaattaatagcaaatacaggcatgtcatttggcgaaggtggacctaataca
tggaattcgtcagaatcttcagaagaagaaataaacgatgttgaaattactgcggagata
aagaaagaagaaaataaaatagaagatatagaattaagtggagacagtgaagacgaagct
atcgaaatgttagaaacaaaggatttaatgtaa
DBGET
integrated database retrieval system
