Bombus pyrosoma: 122565721
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Entry
122565721 CDS
T07776
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122565721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122565721
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122565721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122565721
NCBI-ProteinID:
XP_043577935
LinkDB
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Position
LG1:complement(6177950..6179869)
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AA seq
278 aa
AA seq
DB search
MDSQYKIIHPVKYLQDHLAQDIRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTVVC
GIKAELAAPKAESPECGYIVPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAID
LKDLCVYKGKLVWVLYCDLVCINYDGSIIDACIGALTATLSTLTLPETLYNVETGRVSVN
STKRIRFLVKALPVSITFAIFNDQLLVADPTDDEESLCLGRLTIVMNEEKICCIHKPGGI
SISQDLFLKSLSKCKKRAELIRSLIDAAISTIKQETFK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaatacaaaattatacatcctgtgaaatatttacaagaccacttggcacaa
gatattcgaccagatggtaggcagtttttatcttttcgtccaataagtgtaaatatatca
tcaattactcatgccgatagctcagccatattcaaaattggtaacacaacagttgtatgt
ggtattaaagcagagttagcagcacctaaagcagaatctccggagtgtggttacattgtg
ccaaatattgaacttcctccattatgttctcccaaatttcggccaggcccaccaagtgac
caagcacaggtcattacaaaattagtagaaaatattttaagaaattcagcagctattgat
ttaaaagatctttgtgtctataagggtaaactagtatgggtcttatactgtgaccttgta
tgtattaactatgatggttcaataattgatgcttgtattggagcattgactgctacactt
agtactttaaccttacctgaaacactttataatgtagaaactggaagagtatctgtaaat
tccacaaaaagaataaggttcctggttaaagcattaccagtttctataacttttgcaata
tttaatgatcaattgttggttgctgatcctactgatgatgaagaaagtttatgtttagga
agattgacaattgtaatgaatgaagaaaagatttgttgcatacacaaacctggtggaatc
tcaatttcacaagatttatttttaaaaagtttaagtaaatgtaagaaaagagcagagttg
ataaggtcattaattgatgctgctatatcaacaatcaaacaagaaacttttaaataa
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