Bombus pyrosoma: 122565851
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Entry
122565851 CDS
T07776
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122565851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122565851
03009 Ribosome biogenesis [BR:
bpyo03009
]
122565851
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122565851
Enzymes [BR:
bpyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
122565851
Messenger RNA biogenesis [BR:
bpyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122565851
Ribosome biogenesis [BR:
bpyo03009
]
Eukaryotic type
90S particles
RNase
122565851
Prokaryotic type
rRNA processing factors
122565851
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
122565851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
122565851
NCBI-ProteinID:
XP_043578204
LinkDB
All DBs
Position
LG3:1917028..1927553
Genome browser
AA seq
1306 aa
AA seq
DB search
MANPPPNVGQSYFWGTGVSQPQNMGYYSVPPPNFPPPNFSQPPPSYNIPVSTLPENKGAN
FIPPYHAMGTCYQNEVSNSYDVPYQTPTELQCNNQNYGMSNYSQPVSNFNTNWDDGSAYH
NSDNAEWKSNNYSSDWNKPQNSKNSWYETNKVQEDDRKSSHVKFNDSSKNKRFEWRYRDK
EPSNSYSTSKRRSRSPQNRPRESRSSRSPYRSRHDSQREKYSKYPNKRSVSRERLHSEED
SDRRSIHRKNNLHASRSQRSYISYRSRKRSRSQDSYSSRTASPNNNPPINRDRTERELLL
EKYRQDYCATSKDMERKMDELSAMGPEGIMENARKVWTRTAPADLYYNRDESNPKIMRGT
PKLHELCELFKKVLLNRAAAARALQPPYEPPPRKTRARLCRHKSEACSSSSSDSDSSMDE
DDRTMEELMAKKQHPQRLHPEMWFNDPGEMNDGPLCRCSAKSRRSGIRHGIYAGEGTINK
CDLNTNNADKLYHYRITISPPTNFLTKTPTIIKHDEHEFIFEGFSMLSHFPLVKLPTCKV
IRFNIEYTILYIDEKLPENFMIEELDYFQTYLFKEILELTDFDLQAAQNKSGCGQFHFMP
RFVRDLADNGQEILSMNEVLNYLIKSSKLLIDPDDLPRLVEMPQYKWQNFADEVKGMIVT
YPGKKPCSVRVDQLDRNQADQPPGVIAYPEIVHFGIRPPQLSYAGNADYQKAWRDYVKFR
HLLANMPKPSFEDKRKLEAKENKLQELRTQSKMKRDVTVDVSSEGFYRTGIMCDIVQHAM
LIPVLVCHLRFHKSLDNLERTLGYEFKNRYLLQLALTHPSYRENFGTNPDHARNSLTNCG
IRQPEYGDRRIHYMNTRKRGINTLINIMSRFGARTETESSIAHNERLEFLGDAVVEFLTS
IHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLNLEEYMLYAHGSDLCHDLELRHAMA
NCFEALMGSLFLDGGIEVADRVFGETLFKAEEDLGKVWVNYPKHPLQEQEPTGDRQWIPS
FELLQKLTKFEESIGIVFTHIRLLARAFTDRSIGYTNLTLGSNQRLEFLGDTVLQLIVSE
YLYKYFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGMTQYALYGNPKAELKTKDRADLLEA
FLGALYVDKGLEFCRVFCDVCFFPRLQDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIP
VYKVIECKGPTNTRVYTVAVYFQGKRLAKASGHSIQEAEMNSAKEALEKSQDLFPQLDHQ
KRVIAKSMKMQQWPNKHKTRGRSMKPTDRHDDSDTSQRSKRSRSEA
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcctcctccaaatgttggtcaatcttatttttggggcacaggagtttctcag
ccgcaaaatatgggatattattctgtgccacccccaaattttccacctccaaattttagt
cagccaccaccatcctataatataccagtctctactttgcctgaaaataaaggtgcaaat
tttattccaccgtatcatgctatgggaacatgttatcaaaatgaagtttcaaattcttat
gatgttccttatcaaactccaacggaactacaatgtaacaatcaaaattatggaatgtct
aactattctcaacctgtaagtaattttaacacaaattgggatgatggaagtgcatatcat
aacagtgataatgcagaatggaagtccaataactattcgtctgattggaataaaccacaa
aatagcaaaaattcttggtatgaaacaaataaagttcaagaagatgatagaaaatcatca
catgtaaaatttaatgattcctcaaaaaataaaaggttcgaatggagatatagagacaaa
gagccttctaatagttattcaaccagtaaaagacgttccagaagtccccagaataggcca
agggagagtagatcaagcagatcaccatatagatcaaggcatgattcccaaagagagaaa
tattcaaagtatccaaataaaagatcggtttctagagagcgtttacatagtgaagaggac
tctgacagaagatcaatacacagaaaaaacaatttgcatgcgtcacgctctcagagatca
tatataagttatagaagtaggaagagatctagatctcaagattcttactcatctagaact
gctagcccaaataataatccccccattaacagggatagaactgaaagagagttacttcta
gaaaaatataggcaagattattgtgcaacaagtaaagatatggaaaggaaaatggatgaa
ctatctgcaatgggacctgaaggtattatggaaaatgcaagaaaagtatggacacgtact
gcaccagcagatttatattataatagagatgaaagcaacccaaaaataatgagaggtacg
cctaaactgcatgagttatgcgaattgttcaagaaagtattactaaatagagctgcagct
gcaagagctttacagcctccttatgaaccacccccaagaaaaaccagagctcgtttatgc
aggcataaatctgaagcttgtagtagctcttcttctgacagtgatagttcaatggatgaa
gatgacagaacaatggaagaattaatggcaaagaaacaacatccgcaaagattacatcct
gaaatgtggtttaatgatcctggagaaatgaatgatggaccattgtgtaggtgtagcgca
aaatcaagaaggtccggtattagacatggaatctatgctggagagggcacaataaataaa
tgtgatttaaatacaaataatgccgataaattatatcattatcgaataacaattagcccc
ccaacaaattttcttactaaaacaccaacaattattaagcatgatgagcacgaatttata
tttgaaggattttctatgctctcgcattttcctctcgtaaaattaccgacttgtaaagta
ataagatttaacattgagtatacaatcctttacatagatgagaagttgccagaaaatttt
atgattgaagaattggactatttccaaacttatttatttaaagaaatattggaacttaca
gactttgatttacaagctgcgcaaaataaatctggttgtggtcaatttcattttatgcca
agattcgttcgtgatttagctgataatgggcaggaaatattatccatgaatgaggtttta
aattatttaatcaaaagtagtaaattgttaatagatccagacgatctacctaggttagta
gagatgccccaatataaatggcaaaattttgcggacgaagtaaagggtatgattgttaca
tatcctgggaaaaaaccatgcagtgttcgtgtagatcagttagataggaaccaagcggat
cagccacctggtgtaattgcataccctgaaattgtacattttggaattagaccaccgcaa
cttagttatgcgggaaatgcagattaccaaaaagcatggcgtgactatgtaaaatttcgt
catttattggctaacatgccaaaaccatcgtttgaagataaacgaaagctagaagcaaaa
gagaataagcttcaggaattaagaacccaaagcaaaatgaaacgcgacgttactgtggat
gttagttctgaaggattttatagaactggaataatgtgtgatatagtacaacatgcaatg
ttaattccagtacttgtttgtcatttaagatttcataaatctttagataacttagagcgt
accttaggctatgaatttaaaaacagatatcttcttcagttagctctaacacatcctagt
taccgtgaaaattttggtacgaatccagatcatgcacggaattctttgactaattgtgga
ataagacaaccggaatacggtgatcggcgaatacattatatgaatactcgaaaacgtggt
attaatacattaatcaatataatgtcaagatttggtgcgagaaccgaaactgaatcttcg
atagcgcacaatgaaagattggagttcttaggagatgcagtagtagaatttctaacatcg
attcatttatttcatatgtttcctgacttagaagaaggtggtttggctacttacagagca
gcaattgttcaaaatcaacacctcgctgtattagcaaagaaattaaatctagaggaatat
atgctctacgcacacggaagtgacctttgccatgatttagaattacgacatgcaatggca
aattgttttgaggcattaatgggttcattatttcttgatggtggtatagaagttgcagat
agagtttttggcgaaacgcttttcaaggctgaagaagatctcggaaaagtttgggtaaat
tacccaaaacatcctttgcaagagcaagaaccgacaggtgatagacaatggataccaagt
tttgaactattgcaaaaattaacaaaatttgaagaatccattggtattgtgtttactcat
atccgtcttttggctagagcgtttaccgatcgcagtataggatacacgaacttaacactg
ggttctaatcaacgtttagaatttttaggagacactgtattacaattgatagtttccgaa
tatttatacaaatattttccagaacatcatgaagggcatctatctttattacgaagttct
cttgtaaataataaaactcaagctgtagtatgtgatgatttggggatgactcagtatgca
ctttatggtaatccaaaagccgaattaaaaacaaaggacagggcagatttattggaagcg
tttctgggagctctttacgtcgataagggcttagaattttgtcgtgtcttttgtgacgta
tgtttcttcccacgtttacaagatttcattatgaatcaagattggaacgatccaaagagt
aaattgcagcaatgttgcttaacattaagaacaatggatggcggagaacctgatattcct
gtatacaaagtgattgagtgtaaaggaccaacaaatacaagagtttataccgttgctgta
tatttccaaggaaaacgattagcaaaggcatcaggtcatagtattcaagaagcagagatg
aattcagcaaaagaagctttagaaaaatctcaagatttgtttccgcaactagatcatcaa
aaacgtgtaatagcgaagagtatgaaaatgcaacagtggccaaataaacataaaacaagg
ggaagatccatgaaacctacagatagacacgatgattctgatactagtcagcgatctaaa
agaagccgtagcgaagcataa
DBGET
integrated database retrieval system
