Bombus pyrosoma: 122566105
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Entry
122566105 CDS
T07776
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122566105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpyo02000
]
122566105
Transporters [BR:
bpyo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
122566105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
SMC_N
RsgA_GTPase
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122566105
NCBI-ProteinID:
XP_043578785
LinkDB
All DBs
Position
LG3:complement(8555701..8590624)
Genome browser
AA seq
1718 aa
AA seq
DB search
MDMCGVYLSQLRAMLVRNILLKKREKRKTTAEIFLPLCTLGVLIVVKVLPPNPNYPAMTT
QRQEGGIFETFNGYRNNTIAVVPNSTETLTFLNSMNALWASMWDYPGKLPLNFMVFDTKD
DLQAAYWRDPYSVPLAVIFEDSQPISQRLSYEIRTNPSYTNPPSPTELYSAPVTCRKDTS
HWLGGVLSMETGGSCPANNYLHSGFLALQMIMDITKIRLDTGNTDVTVPDVKLEMFPKEA
FTANWMLALRVVIPLFMVLSLSQFVTYLLILIVGEKEKKIKEGMKIMGLKDSIFWLSWFI
IYSVFVLLLSAVAVILLFTLQMFQHTHFLPIFLLVVLYSFSIIMFAFMITPFFDTSRTAG
VLGNFAVTIMSLMYFIQVFVNDSSSVPFWLVSLLSPTGVALAMDKALVLDLQGEGVNFDN
LWSGPGIPFGGSLIMMTLDIILYACLAYYFDCVIPSEYGTKRTPWFCFTPEFWCQRKAPR
TYLQVPSSNGESNSFIPGEETNRDVEPVVREMKGREAIRIVDLYKSYQKCRKPEIKAVNG
INLTIYEGQITAILGHNGAGKTSLFNILTGLTAPTAGTALIFGYDVRDSNDMQMIRSMTG
VCPQHDILFDLLTPREHLEFFAAVRGIPKSMIEHEVKKTLKDIDLTEKANTFAKYLSGGQ
KRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSRRHGKVILLTTHFMDEADIL
ADRKAVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHAITRLVTCHVSKAEKARR
HGRELSFILPHNSVENFAPLFSAIEHEIKTRSSRLGISSYGVSMTTLEEVFLHLEKDEGP
EYTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQNDGQAKEAGDLPDGVHSDR
NPPVLGLGLDPIKVRPNFLQTLYAMLRLRILRLFRNIQLLYFTIFAPLLLVVVGLHLNSI
ETVEIKMQSLTLNTDTYGNETKLLYANNTDHDITNLIDGINQDVKYIEEYYGNFANLLKI
APHMSAFNINEYSLSRINLTVAYNDTMQHSLPILINLLSNTYYRLLSNENNLKPIEVKTH
PFQQTSQPQGFNIGTASTALFIGMNFVLLPITLVVDVVYDREIKAKNQLRVNGLSFSMYF
LTYFIVLVGLMSFICLCILGIIFLFDVPSLQEVPALITLAGLFMLYCPSSILFSTCLSYI
FDKMDSAQSILPNIATFIGLIPFILVTILDMLGLSGTAAFVLHVIFSLLNTLYVPYAAVY
YVERVHLMCSINAACHHLTMSDYLTTEIILMAFGVLLHCPVWFFVLLLLDIKKSGGNVSD
VLKYFLRNGGSIGEEIMENSDIGEHEDADVKAEKQKVFNLITSSAVQEPPVVLVQNLRKE
YRQQDTGSCSCCSKQDEEASQIQRKIAVRNLSLAVEPGEVFGLLGHNGAGKTTTMKIIIA
EEAATRGRVQIGGHNINSSMTEAFKQMGYCPQHDAQWKNITVREHLESYAAIRGVPWSDI
GRIVDLYLTGLQIHEHADKQAHECSGGTRRKLSFAMAMIGGPKVVLMDEPSAGMDPRSKR
FLWDTILASFQGGRGAILTTHSMEEADALCSRVGIMVKGELRCIGSTQHLKNLYGAGYTL
EMKLLGGDCTPTTPSGDRITILKEFVSSLFPDATLEESFADRLVFAVPQHAVTSLAECFT
QLEKAKLELDIEEYSFSQTTLEQVFLKFSHYDESNSGE
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtgcggggtctacttgtctcagctgcgggcgatgctcgtgaggaatatcctg
ttgaagaagcgcgagaagcggaagactacggcggagattttcctccccctttgcacccta
ggtgtattaatagtggtaaaagttttaccaccgaatccaaactatcccgcaatgacgacg
cagaggcaggagggtggtatattcgagacgttcaatggctacaggaacaacacaatagcc
gttgttccaaactcaacagaaactttgacttttttaaattcgatgaatgccctgtgggca
tcaatgtgggattatcctggcaaacttcccttaaatttcatggtgttcgatacaaaggat
gatctgcaagcagcgtattggagagacccatatagcgtacctttagcagtaatcttcgag
gattctcaacccatatctcagcgtctctcgtacgagataagaactaatccatcatatacg
aatccaccttcgccaactgaattgtattccgccccagttacttgccgaaaggatacgagc
cattggctgggaggtgtattgtcgatggaaactggtggatcatgtcctgcgaataactat
ttgcactcaggtttcctagcattacaaatgataatggatatcacaaagataagactagac
acagggaatacagatgtaactgtaccggatgttaagctagaaatgttccctaaagaagct
ttcaccgcaaactggatgctggccttgagagttgttatacctctttttatggtcctctct
ctttcacaattcgtcacttatcttctgatcctaatagtcggcgaaaaggagaaaaagatc
aaggaaggaatgaagataatgggcctaaaggattcgatattctggttatcatggttcatt
atctacagcgtttttgtcttattactctctgccgtcgcagtaatactacttttcacacta
caaatgtttcaacacacacactttttaccgatattccttttagtagtgctctacagcttc
tccataatcatgttcgcttttatgataacacctttcttcgacacgtcacgaactgccggt
gtactaggcaattttgcagtcacgataatgagcttgatgtattttattcaagtctttgtg
aatgactctagttcagttccgttttggttagtctctcttcttagtccaacaggcgttgct
ttggctatggataaggctcttgtattagatctacaaggagaaggagttaactttgacaat
ctttggtcaggtcctggtataccatttgggggaagtcttattatgatgactttagacata
attctctatgcttgcttagcttattattttgactgcgtcattccaagtgaatacgggacg
aagagaactccttggttttgcttcacgcctgagttttggtgtcaaagaaaagctccacgg
acgtatttgcaggtaccatcgtcgaatggtgaatcaaattcttttattcctggtgaagag
actaatcgtgatgttgaacctgtggtgcgcgagatgaagggtcgtgaagcgattagaata
gttgatctttacaagtcctaccaaaaatgtcgtaagccagaaattaaagccgtaaatggc
atcaatttaacgatttacgagggacaaatcacggcgatacttggacacaacggagctgga
aaaacaagtctcttcaatattttaactggcctgaccgcacctactgctggcactgccttg
atatttggttatgacgttcgagattccaatgatatgcagatgattagaagcatgactggc
gtttgtccacaacatgatatcctttttgatcttctcacacctcgcgaacaccttgaattt
ttcgctgctgtacgtggcatcccaaaatcgatgatagaacatgaggtgaaaaaaacttta
aaagacatcgatttaactgagaaagcaaatacttttgcgaaatacttgagtggaggacaa
aaaaggaaattgtctgtaggtattgccattatcggtgatccgaagattattatcctcgat
gaacctacagctggggttgatccctactccaggagacagatgtggtctttcttacaatct
agacgtcatggaaaagtgattctattgactactcattttatggatgaggcggatatatta
gcagataggaaagcagttattagtaaaggaaagctgagatgctgtggcagttctttattc
ttaaaaaataaatttggtattggatatcacttaacgttagtacttgaaggaaatgcaaga
gaacacgctattaccagattagtaacatgtcatgtctcaaaagcagaaaaagctagacgt
catggacgtgaactgagctttattttacctcataattcagtagaaaacttcgcaccactt
ttctcagctatagagcacgaaattaaaacccgatcgagtagattaggtattagcagctat
ggagtatcaatgactactttagaagaagtatttctgcatttagaaaaggatgaaggccct
gaatacacaatggataatttatcaaaaaagatggtgcgcaatcgtgcattaagcagatct
ttatcgttgcaatctaagagtacttcttatcagagtttgcagaacgaaggtgtcactgtt
cagaatgatggtcaagcaaaagaggcaggagatttgcctgatggcgtccatagtgataga
aatcctcctgttcttggccttggactagaccccataaaagttcggcctaatttccttcaa
accttgtacgctatgcttcgcctaaggatacttagactcttcaggaacattcagttattg
tacttcactatcttcgcgcctcttcttctagtagtcgttggcctccatttaaatagcatt
gaaacagttgaaatcaaaatgcaatctcttacattgaatactgatacttatggaaatgag
actaaacttttgtacgcgaataataccgaccatgatatcacaaatttaatcgatggaata
aatcaagatgtgaagtacattgaagagtattacgggaattttgcaaatttgttaaaaatc
gcaccacatatgtctgctttcaatatcaatgaatatagtctgtccagaattaatttgact
gtcgcatataatgataccatgcaacattccctaccaattttaataaacttgttatcaaac
acttattacagattactctcaaatgaaaacaatttaaaaccgattgaagttaagacacat
cctttccaacaaacttctcagccacagggattcaatattggcacagcgagtaccgcactg
tttattggaatgaattttgtattgttgccaataactttagttgtggacgtggtctatgat
cgtgaaataaaagcgaagaatcagcttcgtgtgaatggtctgtcattttcgatgtacttt
ctgacgtactttattgtacttgtcggcctgatgtctttcatctgtttatgtattcttggc
atcatatttctctttgacgtgccttcgcttcaagaagtaccagcactcatcaccctagcc
ggtcttttcatgctttattgcccatcatccattctattctctacgtgtttgagttacatc
tttgacaagatggattccgctcaaagcattttgcccaatattgcaactttcattggactt
ataccgtttatactagtcacgattcttgacatgctgggtcttagtggaacagcagcgttt
gttttacacgtaattttttctctactgaacacattatacgtaccatatgctgcagtgtat
tacgtagaaagagtacatctaatgtgctctatcaacgctgcttgccatcatctgactatg
tctgattatttaaccacggagatcattctaatggcctttggcgtgctcctgcattgtccg
gtgtggttcttcgtgcttttactgttggacattaaaaagagtggtggcaatgttagtgat
gtattgaagtatttcctgcgcaatggcggttcgattggtgaagaaataatggagaactct
gacattggagaacatgaagatgcagacgttaaagcagaaaaacaaaaagtttttaatctc
attacttcatctgccgttcaggaaccacctgtagttctagtacagaacttgagaaaggag
tatcgacagcaggatacaggttcatgtagttgttgttcgaaacaagatgaagaagctagt
caaatacaacgaaaaattgctgtaagaaatctttcgttagcggttgagccaggagaagtg
ttcggtttgctgggccacaatggtgctggaaagacaacaacaatgaagattatcatagct
gaagaagcggccactcgaggaagagtacagatcggtggtcataatattaattcaagtatg
acagaagctttcaaacaaatgggatactgtccccaacatgatgctcaatggaagaatatt
accgttagggaacatttagaatcttacgctgcgattcgtggtgtaccatggagtgatatt
ggcagaatcgtagatttatacctcaccggtttgcaaattcatgaacacgccgataaacaa
gctcatgagtgttcgggtggaactagaaggaaacttagttttgccatggcaatgatcgga
ggtccaaaagttgttctaatggacgaacctagtgcaggaatggatcctaggtcaaagagg
tttttatgggatacaatccttgctagtttccagggtggtagaggagcaattcttaccact
cattcaatggaggaagctgatgctctttgttctagagtgggtataatggtaaaaggagag
ttaagatgtattggttctactcaacatctgaagaatttatacggtgcaggctataccctc
gaaatgaaacttttaggcggtgattgtacaccaacgacaccgtccggtgataggattacg
attctgaaagaatttgtttccagtcttttcccagatgcaactctcgaagaaagttttgcc
gacagattagtttttgctgttccccaacatgcagttacctcgctggccgagtgttttacg
cagttggagaaagccaagctcgagctggatatcgaagagtatagcttcagtcaaaccact
ttggaacaagttttccttaaattttcccactatgacgaatctaactcgggagaatga
DBGET
integrated database retrieval system
