KEGG   Bombus pyrosoma: 122566137
Entry
122566137         CDS       T07776                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03040  Spliceosome
bpyo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122566137
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122566137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpyo03041]
    122566137
   04121 Ubiquitin system [BR:bpyo04121]
    122566137
   03400 DNA repair and recombination proteins [BR:bpyo03400]
    122566137
Enzymes [BR:bpyo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122566137
Spliceosome [BR:bpyo03041]
 Complex B
  Other components
   Prp19 complex
    122566137
 Complex C
   Prp19-CDC5 complex
    122566137
Ubiquitin system [BR:bpyo04121]
 Ubiquitin ligases (E3)
  U-box type E3
   122566137
DNA repair and recombination proteins [BR:bpyo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122566137
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Prp19 WDR55 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_IFT122_1st eIF2A Beta-prop_DCAF4 Tricorn_2nd U-box B-prop_COPA_B_2nd Beta-prop_ACSF4 PAS_11 RMC1_N PT-TG Cytochrom_D1
Other DBs
NCBI-GeneID: 122566137
NCBI-ProteinID: XP_043578893
LinkDB
Position
LG3:4501704..4504556
AA seq 504 aa
MALSCAISNEVPEHPVVSPVSGSIFEKRLIEKYVAENGVDPITGKELTVDQLIDIKTTAI
VKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHSLYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVQATTIPQPALAVEAGGTAAQPMEQAGITEDVIQKLQERA
TVLTQERKRRGRSVPEDLLPQDSIRAFQTLASHPGLHSASVPGILALDIHSADTSKILTG
GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDIVMTASPDTTIRVWNVGTSQTTL
LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKVAGQASQPLTTAQFHPD
GLIFGTGTQDSQVKIWDLKEQSNVANFPGHSGPITAISFSENGYYLATAAEDSCVKLWDL
RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTAAATGV
RFGKHAQYIASTSMDRTLKLYGLP
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgctctcttgtgcgatttctaacgaagtcccggaacacccggtcgtatctccagta
tctggttccatatttgagaaacgtttaattgagaaatatgtagctgaaaatggagtggat
cccataactggaaaggaattaactgtagatcaacttattgatatcaaaacaactgcaata
gttaaacctaaaccaccaagtgccacatcaattccagctatattgaaaattttacaagat
gagtgggatgctgttatgttacattcatttacgcttaggcaacaacttcaaacagctaga
caggaactatctcattcgttatatcaacatgatgcagcatgccgtgtaattgctagattg
acaaaagaagtaacagcagccagagaagctttagcaacgttgaaacctcaggctggaatt
gttcaggctactaccatcccacaacctgcacttgcagtagaagctggaggtacagctgct
caacctatggaacaagctggtattactgaagatgtgatacaaaaacttcaagaaagagca
acagtactcactcaggaaaggaaacgtcgcggacgttcggttcctgaagatctacttcca
caagatagtattcgcgcatttcaaacacttgcgtcacatcctggtctccattcagccagt
gttcctggtatacttgcacttgacattcacagtgcagataccagtaaaatcttaacaggt
ggtgctgataaaaatgccacagtatttaacaaagatacagagcaagttgttgcaatatta
aagggacacactaaaaaggttactagagtaatttatcatccagaagaagatattgtaatg
actgcatcacctgatactacaatacgtgtatggaatgtaggaaccagtcaaacaactttg
ttattaaaagctcatgatgcccctgtgactgggttgtccttacacccaacaggcgattat
ttactaagttcatcactggatcaacattgggcattttctgatatacgtactggtagatta
ttgactaaggttgctggacaagctagccaaccattaaccacggctcagtttcaccctgat
ggattgatctttggcactggaactcaggattcacaagtgaaaatttgggatttaaaagaa
caatcaaacgtagctaatttcccaggtcattcaggtccaattacggcaattagtttctct
gagaatggttattatttagctactgctgcagaggattcttgtgtgaaactttgggatttg
cgtaaactaaagaactttaaaacccttcaattagaagaatcatatgaagttaaagatatt
tgctttgatcaaagtggaacgtatttggcagtagctggaacagacgtaagagtgtatttg
tgtaaacagtggcaagaactgaaagtgcttaatgaccatacggcagccgcaactggtgtt
cgttttggaaaacatgcacagtatatagcgtcgactagtatggacagaactttaaaactt
tatggtttaccttaa

DBGET integrated database retrieval system