KEGG   Bombus pyrosoma: 122566204
Entry
122566204         CDS       T07776                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122566204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpyo03021]
    122566204
   03036 Chromosome and associated proteins [BR:bpyo03036]
    122566204
Transcription machinery [BR:bpyo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122566204
   Coactivators
    SAGA/TFTC/STAGA complex
     122566204
Chromosome and associated proteins [BR:bpyo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     122566204
    STAGA complex
     122566204
    TFTC complex
     122566204
    SAGA complex
     122566204
    SLIK complex
     122566204
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I TFIID_NTD2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_IFT122_1st Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_Nup120_160 WD40_like Beta-prop_DCAF12 Beta-prop_DCAF4 Cytochrom_D1 RMC1_N Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Mala_s_1-like Beta-prop_ELP1_1st DUF7165 CTLH DUF5888
Other DBs
NCBI-GeneID: 122566204
NCBI-ProteinID: XP_043579076
LinkDB
Position
LG1:9953976..9957174
AA seq 589 aa
MKRLKSELINATIESYLKRRHYQTSDIFCKGNQIHCRTSDEMTLNATAASATSQDNSIIF
SAISIDVTAADQAYQRLKMWVNIVLDDKLKMELKGLLYPVFCHLYLEMLHTGNRQAAIQF
LKSHQNEFNSETEKDFLEELSSVFSVQDIELRPLVNSFRTRKYKVDMSDVAHLCLQQFLS
KHGHIILMQIINTHVTIIKKMDVPETDTEGCEDAGIRSEVGINGYVEQPSGTGADREMRE
LQEAIRLIRNNAHQPLRIFAVNNAVENASSGVIPPNMDKLAVGFSTTEIRLWGINETVLI
KPKYEEPSFTFASDIPFLHKFYDTSDRMTEGGAVILRGHTDIVHDLRFIPESDILLSVSS
DKDMRAWRLNDYTCAAIYSGHNYPIWCMDLSVFNLYVATGSHDRTAKLWSLDRIFPLRIF
AGHFLDINCVKFHPNARYLATGSADKTVRLWDKDDGNLLRVYIGAQSTIYSLAFSPDGKY
LAAAGDDKSISIWDLATNALLTELKGHEDTIMNLDWSCDGQYIASGSLDGTIRLWPTHDH
VKIVNSNSSSLVPETESPQIFSTYCSSILSLGYYNKNNSLVCIGTVDNL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgtttgaagagtgaattaattaatgctacaattgaatcatatttaaaacgacgt
cattatcagactagcgacattttttgtaaaggcaatcaaatacattgccgaacaagtgat
gaaatgactctgaatgcaactgctgcttctgccacttcccaagataattcaatcattttt
agtgccattagcattgatgttactgctgcagatcaagcgtatcaacggttgaagatgtgg
gtaaatattgtactcgatgataaattaaaaatggaattaaaagggcttctataccctgta
ttttgtcacttgtatttagagatgctacatactggtaacaggcaagcagcaattcaattt
ctaaaatcacatcaaaatgaattcaacagtgaaacagagaaagattttttagaagaacta
tctagtgtattttcagtacaagatattgaattaagacctttagttaattcatttagaact
agaaaatataaagtggatatgtcagatgttgctcacttatgtcttcaacaatttctttca
aaacatggtcatataatattaatgcagataataaacactcatgtaacaataattaagaaa
atggatgtgcctgaaacagatacagaaggatgtgaagatgcaggtatacgttctgaggtg
gggattaatggatatgtagaacaaccatcaggtactggagctgaccgtgaaatgagagaa
ttacaagaggctataagattaattcgaaataatgctcatcaacctctacgaatatttgca
gtaaataatgctgttgaaaatgcaagtagtggtgtcattccacccaatatggacaaatta
gcagtaggatttagtactacagagattaggctgtggggtataaatgaaacagtattaatt
aagccaaagtatgaagaaccttcctttacatttgcctctgatattccatttttacataaa
ttttacgatacgtcagatagaatgactgaaggaggggcagtgatacttagaggacataca
gatattgtacatgatttaaggtttattccagaatcagatatattactttctgtatctagt
gataaagatatgagggcatggagacttaatgattacacatgtgccgcaatttatagtggt
cataattatcctatatggtgtatggatcttagtgtatttaatctatatgtagcaactggt
tctcatgacagaactgccaaattatggtctttagataggatatttccattacgtatattt
gccggtcactttttagatataaattgtgtcaaatttcacccaaacgctcgatatttagcg
actgggtctgctgataagactgtgagattatgggataaggacgacggaaatttattaagg
gtatatataggcgcgcagtcaacgatttatagtttagcttttagtccagatgggaaatat
ttggcagctgcaggtgatgacaaatctatttctatttgggatttagcaactaacgcattg
ttaactgaacttaaaggccacgaagacacgattatgaatttagactggagttgtgatggt
caatacattgctagtggaagtttggatggcactattcgtttatggcctacacatgatcat
gttaaaattgttaatagcaattcatcaagtctagtacctgaaacagaatcaccacaaata
ttctcaacttattgttcgagcatcctttctttaggttattacaataaaaataattcgctc
gtgtgcattggaactgtggacaatttgtaa

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