KEGG   Bombus pyrosoma: 122566284
Entry
122566284         CDS       T07776                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122566284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpyo03041]
    122566284
   03036 Chromosome and associated proteins [BR:bpyo03036]
    122566284
Spliceosome [BR:bpyo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122566284
 Complex B
    122566284
 Complex C
   U2 SnRNP specific factors
    122566284
Chromosome and associated proteins [BR:bpyo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    122566284
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 122566284
NCBI-ProteinID: XP_043579278
LinkDB
Position
LG3:10703632..10711700
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKKEIQNASTEKDQVGLGKTGFYDQDIYDGSNNKYEGYVT
SIAANDEIEDEDYEPTTFSTNKRPGYTAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDIGSRTYTVIMREQLLKGEETELRKKLAEKAKEGT
LKANGEPKPAPKKRGRWDQTDDAPTPKKPSGTTATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWDATPGHATPGAATPGRETPSHEKTVSSRRNRWDETPKTERETPGH
SSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQT
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFP
PGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQTEDKTAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggattccattcccagaacgcatgaagatattgaagcacaaatacgagaaatacaatca
aagaaaaaagagattcaaaatgcatctactgaaaaggaccaagtagggctaggaaagact
gggttttatgatcaagatatttatgatggaagtaataataaatatgaaggctatgttaca
tctattgcagccaatgatgagattgaggatgaggactatgaaccaacaacttttagtact
aataaaagaccaggctatactgcaccagcagcattactcaacgatgttgcacagagtgag
aaggattacgatccttttgcggacagacgacgacccaccatagctgacagagaagatgaa
tataggcaaaaaagacgaagaatgattatatcgcctgagcgtgtcgatccttttgcagaa
ggtggtaagacgccagacatcggttctaggacatataccgtgattatgcgggaacagtta
ttaaaaggagaagaaactgagttaagaaaaaaattagcagaaaaagccaaagagggaaca
ttaaaagcaaatggtgaacctaaacctgcacctaagaaaagaggtcgttgggaccaaaca
gatgatgctccaacacctaagaaaccatctggtacaactgcaacaccaacatcatgggac
aatgcagatgtaacacctgctgcaattaggtgggatgaaacgcctggtcatggtaaaggt
ggagaaactcctggtgcaacaccaggcgtaagtacaagaatgtgggatgctactccagga
catgcaacgcctggtgcagctactcctggtagagaaactccttctcatgaaaaaactgtt
tcaagtcgtagaaatcgttgggatgagacgccaaaaactgaacgtgaaacacctggtcat
agcagtggttgggcagagactccaagaacagatcgagttgcaggagatttaattcaggag
acaccaacaccttctgctagcaaacgtcgaagtcgatgggatgaaacaccttcaaatcag
acacctgggtctatgacgccacaaactccagcaactcctcttactacaccacatcaaact
tcaattttaacacctagtggtgtaacaccaacgggacctaaagctatgggattggcaact
ccaacaccaggacatttaatgtcaatgacaccagaacagcttcaagcatatcgttgggaa
cgagaaatcgatgagagaaatagaccactctcagacgatgaactggatgccctgttccca
cctggatacaaagttttgcaaccacctgcgggatatattccaattcgcacacctgcaagg
aagctcactgctacaccgacgcctattgcgggcacaccacaaggatttttcattcaaact
gaagataaaactgcgaaattcgtagacaatcaaccaaaaggaaacttgccttttatgaaa
ccagaagacgcacaatattttgataagttattggtcgatgttgatgaggaaacgcttagt
cctgaagaacagaaagagagaaagataatgaagttactattaaaaattaaaaatggcaca
ccaccaatgaggaaagctgctctaagacaaattacagataaagcaagagaatttggcgcg
ggtcctttatttaatcagatactccctcttcttatgtctcctacacttgaagatcaagaa
cgtcatcttcttgtgaaagttattgatcgtattctttataaactggatgatttggttaga
ccctacgtgcataagattttggtcgttattgaacctttacttattgatgaagattactat
gctcgtgttgaaggtagagaaattatctctaatttggctaaagctgctggtttagcaacg
atgatctcgactatgagaccagatattgacaatattgatgaatacgttcgtaacacgaca
gccagagcattcgctgtggtcgcatcagctctaggaattccttctttgcttccatttctt
aaagccgtatgtcgcagcaaaaagtcatggcaagctcgtcacacgggtattaaaattgta
caacagattgctattcttatgggatgtgctatattaccacatttgaagagtttggttgaa
attatagaacatggtctcgttgatgaacaacagaaagttcgtactatcactgctttagca
attgctgcattggcagaagcagccacaccatatggtattgagagctttgactccgttcta
aaaccgctttggaaaggtattcgtacacatagaggaaaaggccttgctgcattcttaaag
gctattggttatttaattcctcttatggacgccgaatatgccaattattacactcgtgag
gtgatgttaattcttattcgtgaatttcagtctcctgatgaagaaatgaaaaagattgtt
ctgaaagtagtgaaacaatgttgtggaacagatggtgtagaagcacaatacattaaagac
gaaatcctcccacatttcttcaaacatttttggaaccatcgaatggctttagatcgtaga
aattacagacaacttgttgacacgactgtagaaattgcaaataaagttggtgcatcagaa
attataaatcgtgtggtagacgatttaaaagatgaaaatgaacagtataggaagatggtt
atggaaaccattgaaaaaataatgggaaatttaggagccgcggatgttgattctcgtttg
gaagaacaactcattgatggtattttatatgctttccaggaacaaacaacagaggatgtt
gtaatgttgaatggttttggaactattgtgaatacattaggaaaaagagtgaaagcatac
cttccacaaatttgtggaacaattttgtggagattgaacaataaatctgcaaaagtaaga
caacaagctgccgacttgatatcacgaattgccgttgtcatgaaaacttgccaagaggaa
aaactaatgggtcatttaggtgtcgttctttatgaatatttaggggaagagtatcctgag
gtattaggaagcattttgggtgcattgaaagctattgtaaatgtcataggaatgacaaaa
atgacaccacctattaaagacttactaccacgtcttactcctattctgaaaaacaggcat
gaaaaggtacaagaaaattgtattgatctcgtaggtagaatcgcagacagaggacccgag
tatgtatccgccagagaatggatgagaatatgcttcgaacttttagaattgctcaaagct
cacaagaaagcgattcgaagagctacagtaaatacatttggttatattgccaaagcaata
ggacctcacgatgtattagcaaccctcttgaataacttgaaggtacaagaacgtcaaaat
cgtgtatgcactacagtagctatagctattgtagctgaaacctgtagtccatttacggta
cttcctgctttgatgaatgagtatagagtaccagaactaaacgtacaaaatggtgtatta
aagtctttatcctttttgtttgaatatatcggagaaatgggaaaagattacatttacgcc
gttagcccactattagaagatgcactcatggacagagatttagtgcacaggcaaactgca
tgtgctgctattaaacacatggcattgggtgtttacggatttggttgtgaagatgcattg
atacatttattgaatcacgtatggcccaatgtttttgaaacttcacctcacttggtgcaa
gcatttatggacgctgtagatggtttacgtgttgctcttgggccaattaaaatactacaa
tacactttgcagggattgttccatccggcacgaaaagtacgagatgtatattggaaaatt
tataattctctttatataggtggacaagatgctcttgtagctggttatcctcgaattatg
aatgatccaaagaatcagtatattagatacgaattggactatgttttgtaa

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