Bombus pyrosoma: 122566306
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Entry
122566306 CDS
T07776
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122566306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122566306
03012 Translation factors [BR:
bpyo03012
]
122566306
Enzymes [BR:
bpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122566306
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122566306
Translation factors [BR:
bpyo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122566306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
ATPase
AAA_14
NPHP3_N
ABC_tran
AAA_19
NB-ARC
PhoH
NACHT
Sigma54_activat
RsgA_GTPase
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
122566306
NCBI-ProteinID:
XP_043579340
LinkDB
All DBs
Position
LG3:complement(9578327..9582990)
Genome browser
AA seq
989 aa
AA seq
DB search
MSHPYGQFSAQRMYSRRRHDLMAICLLFRGLGDRGESSHSGGSHFERDSRGRGRGGGHPP
WLRGKEIGLYYRDKAKEKTKKKETRVIKLPEHLQKKIEHVLDNSKGYYEKLYNDAYTEDT
YGVLENKYVHIRDSQFKRKFMNMVSGNMQENLARALLVKSKLERDTELDKKLLNEYRTLQ
SMQEYENMKQFRLKLPSYHKRSKILDLIKENQVIVISGETGCGKTTQVAQYILDDQIEQE
NGSIVRIICTQPRRISAISVAERVAAERAEKLGKSVGFQIRLEKVLPRDRGSITFCTTGM
LLQFMQGDPALKEFSHIILDEIHERSTESDFILALLKLIIPKRPDLKVILMSATLNSERF
SSYYNDCPMIHIPGFTYPVTEFYLEDILSFTQYQFPASAAIPQDHRKHIKKYKQEQRKRD
EFHDVLYPYVRQLIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTKDPGAILVFL
PGMMDIIKLHKIMLENRQYPQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAE
TSITIEDVVYVVDCGKMKFGKFDLQKNVQTLEPEWVSLANAKQRRGRAGRVKAGVCYHLY
SKAREMALDQYPLPEMLRTRLEEVILQIKMLQLGKARTFLASVMDPPNMKAIDLSLDLLR
TLNALDDEEQLTPLGYHLAQLPLDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPL
GKEEDARKKKLELNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYYLSFSTLKLLSEM
KTQFAQHLCQMKFMDTENPADINANRNSSNITLVKAVVCAALYPNIAVIRRVTKNGTRAW
TPEDGSVTIHPSSVNDRVREYPNPFITYFTKQLSTAIYLHDTTCVSAPILLFTAPKMSIR
KEKGNYFISLANNQMFACDLQSAQLIQKLQEQFNNMLEYKITHPGTVCWNSFEGDVLNAI
IELVSQKDEELGFSDSDIQNCEDDMHDKD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatccttacggacaattttcagcacaaagaatgtattcgagacgtagacatgat
ttgatggcaatctgtttattatttagaggtttaggagatagaggtgaaagttctcattcg
ggaggatcacattttgaacgtgacagccgtggacgaggcagaggaggaggacatccacct
tggttgagaggcaaagaaatagggctttattatagagataaggccaaagaaaagaccaag
aaaaaggaaactcgagttattaagttacctgaacatcttcagaaaaaaattgaacacgtg
ttagacaattctaaaggatattatgaaaaattatataatgatgcatacactgaggataca
tatggtgtgttagaaaataaatatgtgcacattcgtgactcccaatttaaaagaaaattc
atgaacatggtatctggtaatatgcaagaaaatcttgccagagctttgctggttaaatca
aaattagaaagagatactgaactagataaaaaattattaaatgaatataggacattgcaa
tcaatgcaggagtatgaaaacatgaaacaattcagattaaagttaccatcatatcataaa
agatcaaaaatattagatttgattaaagaaaatcaagttattgtaataagtggagaaact
ggttgtggaaaaacaacacaggttgctcagtatatattggatgaccaaatagaacaagaa
aatggtagcattgtgcgaattatatgtactcaacctaggaggatatcagctatatccgtt
gctgagagagttgcagctgagagagcagagaagcttggtaaatccgttggttttcaaatc
cgacttgaaaaagtattaccaagagatagaggcagcataacattttgtactactggaatg
ttattgcaatttatgcaaggtgatccagccttaaaagaattttctcatattatattagat
gaaattcatgaaagatctaccgaaagtgacttcatccttgctttactgaaactaattatc
cctaaaagacccgatttgaaagttattttaatgagtgcaacacttaactctgaaagattt
tccagttattataatgattgcccaatgattcatattcctggctttacttatccagtaaca
gaattttatttagaggacatcctatcctttacacaatatcaatttcccgcatcagctgca
atacctcaagatcatagaaaacatatcaaaaaatataaacaggaacaacgaaaaagggat
gagtttcatgatgtgctatatccttacgtacgacagcttatagctacgaagaaatattca
aaagaagtaattgaacaattacggaatccaaacagcgagaaattgtctcttgatcttata
gaacaattagttaggtacatttgtaaaactaaagatcctggagctattttagtttttctt
cctggtatgatggatataataaagctacataaaattatgctggaaaatagacagtatcca
caaaatcagtatgttatttatcctcttcattctcgtatgccaactgtcgatcagaagctc
gtatttaaaacaccacctgaaggagttcggaagataataattgcaacttcgatagccgaa
acttctataactattgaagatgtagtatatgttgttgattgtggaaaaatgaaatttggt
aaattcgatctccaaaaaaatgttcaaactttggaacctgaatgggtatcgttagctaat
gctaaacaaagaagaggtagagcaggcagagtaaaagctggtgtctgttatcatttgtac
tcaaaagctagagaaatggcactagaccagtatcctttacccgaaatgttaaggacgcgt
ttagaggaagttattttacaaataaaaatgttacaattgggaaaagctagaactttctta
gcaagtgttatggatcctccaaatatgaaagctatagatctatctttggatttactccga
actctcaacgcgttggatgacgaggaacaattgactcctttggggtatcatttggctcag
ttacctctagatccacgaacagggaaaatgatcatatgggcatcattattttcgtgtgta
gaaccagtttttgcaatcgcggcgagtcttagttttaaagatgctttttactgcccactt
ggaaaagaggaagacgcacgaaaaaagaaactcgaattaaatatgaatcaatttagcgat
catatcgcgttatctgaagcattaagaagatttgagatcgcgtataaaaaaagttatgca
agttctttttgtagggaatattacctctcttttagtacgctcaaactactttctgaaatg
aaaactcaatttgctcaacatttgtgtcaaatgaaatttatggacacagaaaatcccgct
gacattaatgctaacaggaactccagtaacataacattagtgaaagcagtagtatgtgct
gcattgtatcctaatattgctgttataaggagagttacaaaaaatggaaccagagcatgg
actccagaagatggcagcgttactatacatccgtcaagtgtaaatgatagagttagggaa
tatcccaacccatttattacatattttacaaagcaactctcgacagcgatatatttgcat
gatactacatgcgttagcgcgccaattttattatttactgctccaaaaatgtctataaga
aaagaaaaaggaaactattttatcagcttagcaaacaatcaaatgtttgcttgcgatttg
caaagtgcacaacttattcagaaattacaagaacaattcaataatatgttagagtataaa
ataacgcatccgggaacagtatgctggaatagctttgaaggcgatgtattaaatgctatc
atagaactggtttctcaaaaagacgaggaattgggattttctgattctgatattcaaaat
tgtgaggatgatatgcatgataaagattga
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